RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 EIF2AQ9BY44 585 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 PRG3Q9Y2Y8 225 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 TDRD15B5MCY1 1934 aaKnown RBP16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 PLXNA3P51805 1871 aa16.42■□□□□ 0.22
NPLOC4-207ENST00000572346 C2CD2LO14523 706 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 INPPL1O15357 1258 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 GFRA3O60609 400 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 SLITRK3O94933 977 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 F13A1P00488 732 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 URODP06132 367 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 AXLP30530 894 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 MXD4Q14582 209 aaPredicted RBP16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 NBR1Q14596 966 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 PCBP1Q15365 356 aaKnown RBP eCLIP16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 OTOP3Q7RTS5 596 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 TAS1R1Q7RTX1 841 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 RNF168Q8IYW5 571 aaPredicted RBP16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 CPB2Q96IY4 423 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 GAD1Q99259 594 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 HES2Q9Y543 173 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 PCDHB6Q9Y5E3 794 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 USP34Q70CQ2 3546 aa16.41■□□□□ 0.22
NPLOC4-207ENST00000572346 ARL5CA6NH57 179 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 INO80B-WBP1J3KQ70 363 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 WNT7AO00755 349 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 EFEMP2O95967 443 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 MLH1P40692 756 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 OR1G1P47890 313 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 TOB1P50616 345 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 NUCB2P80303 420 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 DSC1Q08554 894 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 PKP1Q13835 747 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 ASTLQ6HA08 431 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 ZFP42Q96MM3 310 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 RPS6KC1Q96S38 1066 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 EIF2AK1Q9BQI3 630 aaKnown RBP16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 MFSD1Q9H3U5 465 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 MAN1C1Q9NR34 630 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 MIOSQ9NXC5 875 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 ZFHX2Q9C0A1 2572 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-207ENST00000572346 TEX28O15482 410 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 DGAT1O75907 488 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 LYPLA2O95372 231 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 ADH1AP07327 375 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 TXKP42681 527 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 GLUD2P49448 558 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 SCNN1GP51170 649 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 MBTD1Q05BQ5 628 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 POU5F1BQ06416 359 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 NCBP1Q09161 790 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 CAPSQ13938 189 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 TFDP1Q14186 410 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 AMHR2Q16671 573 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 ASAP3Q8TDY4 903 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 ZNF396Q96N95 335 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 IPO9Q96P70 1041 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 PCDHA12Q9UN75 941 aa16.39■□□□□ 0.21
NPLOC4-207ENST00000572346 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 F8W810 466 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 ARF4P18085 180 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 ARL2P36404 184 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 CLCN5P51795 746 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 PTGDRQ13258 359 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 TDGQ13569 410 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 FOXD4L6Q3SYB3 417 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 KIAA0319Q5VV43 1072 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 FOXD4L3Q6VB84 417 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 APOL6Q9BWW8 343 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 NXF3Q9H4D5 531 aaKnown RBP16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 KCNK12Q9HB15 430 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 RXFP1Q9HBX9 757 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 DUSP12Q9UNI6 340 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 GIT1Q9Y2X7 761 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 ATP6V1DQ9Y5K8 247 aa16.38■□□□□ 0.21
NPLOC4-207ENST00000572346 CCDC195A0A1B0GUA6 201 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 LAD1O00515 517 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 N4BP1O75113 896 aaKnown RBP16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 BMP15O95972 392 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 GLUD1P00367 558 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 GLRA2P23416 452 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 RARRES1P49788 294 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 DSG1Q02413 1049 aa16.37■□□□□ 0.21
NPLOC4-207ENST00000572346 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms