RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 KRT39Q6A163 491 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 MTHFD1LQ6UB35 978 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 NLRP4Q96MN2 994 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 ACO2Q99798 780 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 GPR88Q9GZN0 384 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 TOPORSQ9NS56 1045 aaPredicted RBP24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 ABLIM1O14639 778 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 KIF5CO60282 957 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 FAM189A1O60320 539 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 TOM1L1O75674 476 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 F2P00734 622 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 VAV2P52735 878 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 KLHL30Q0D2K2 578 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 NOGQ13253 232 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 GRIK4Q16099 956 aa24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 PAXIP1Q6ZW49 1069 aaPredicted RBP24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 BZW2Q9Y6E2 419 aaKnown RBP24.45■■□□□ 1.5
VCPKMT-205ENST00000569518 LRRN2O75325 713 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 LDHAP00338 332 aaKnown RBP24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 ACOT2P49753 483 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 MAP2K1Q02750 393 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 ARID5AQ03989 594 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 MBTD1Q05BQ5 628 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 ZBTB41Q5SVQ8 909 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 C15orf39Q6ZRI6 1047 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 KIAA1328Q86T90 577 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 IFNLR1Q8IU57 520 aaPredicted RBP24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 ARHGAP39Q9C0H5 1083 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 LACRTQ9GZZ8 138 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 IFT122Q9HBG6 1241 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 TRIM10Q9UDY6 481 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 TFR2Q9UP52 801 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 Q9Y3F1 56 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 KAT6AQ92794 2004 aa24.44■■□□□ 1.5
VCPKMT-205ENST00000569518 ACKR2O00590 384 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 PROZP22891 400 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 FCGRTP55899 365 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 WNT7BP56706 349 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 DRAP1Q14919 205 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 KAT2BQ92831 832 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 SEMA4DQ92854 862 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 IFIH1Q9BYX4 1025 aaKnown RBP24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 MINDY3Q9H8M7 445 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 MYO1AQ9UBC5 1043 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 PCDHA13Q9Y5I0 950 aa24.43■■□□□ 1.5
VCPKMT-205ENST00000569518 CLDN3O15551 220 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 DLATP10515 647 aaKnown RBP24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 SOX5P35711 763 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 STAT1P42224 750 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 LACTBP83111 547 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 PTK2Q05397 1052 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 GFPT1Q06210 699 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 TSHZ1Q6ZSZ6 1077 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 SV2AQ7L0J3 742 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 JAKMIP2Q96AA8 810 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 L2HGDHQ9H9P8 463 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 FERP16591 822 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 PSMC4P43686 418 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 GPC3P51654 580 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 MCL1Q07820 350 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 ARHGEF19Q8IW93 802 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 ZNF668Q96K58 619 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 PTPRHQ9HD43 1115 aa24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 RBAKQ9NYW8 714 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-205ENST00000569518 PNMA6AP0CW24 399 aaPredicted RBP24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 ANXA13P27216 316 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 TMOD1P28289 359 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 GTF2F1P35269 517 aaKnown RBP eCLIP24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 PHKA2P46019 1235 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 SLC18A3Q16572 532 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 FAM187BQ17R55 369 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 CCDC122Q5T0U0 273 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 ZNF571Q7Z3V5 609 aaPredicted RBP24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 FBXL13Q8NEE6 735 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 TAS1R2Q8TE23 839 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 ZNF516Q92618 1163 aa24.41■■□□□ 1.5
VCPKMT-205ENST00000569518 CNTNAP2Q9UHC6 1331 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 INO80B-WBP1J3KQ70 363 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 AOC2O75106 756 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 IQCF3P0C7M6 154 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 CASQ1P31415 396 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 MATR3P43243 847 aaKnown RBP eCLIP24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 IRX5P78411 483 aaPredicted RBP24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 TRPV1Q8NER1 839 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 INO80BQ9C086 356 aaPredicted RBP24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 PDE11AQ9HCR9 933 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 GUCA1BQ9UMX6 200 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 PTPRJQ12913 1337 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 A0A087X0T9 212 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 RRN3P2A6NIE6 340 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 B4GALT5O43286 388 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 KRT86O43790 486 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 EVI5O60447 810 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 GFPT2O94808 682 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 FAM228BP0C875 321 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 CPT1AP50416 773 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 ZNF569Q5MCW4 686 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 FMNL3Q8IVF7 1028 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 OLIG1Q8TAK6 271 aa24.4■■□□□ 1.5
VCPKMT-205ENST00000569518 LMBR1Q8WVP7 490 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms