RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 PHF7Q9BWX1 381 aaPredicted RBP5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 CWH43Q9H720 699 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 ZSWIM4Q9H7M6 989 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 CD320Q9NPF0 282 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 UBN1Q9NPG3 1134 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 RAPGEFL1Q9UHV5 662 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 PCDHA12Q9UN75 941 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 PIN4Q9Y237 131 aaKnown RBP5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 NR2E1Q9Y466 385 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 DNMT3AQ9Y6K1 912 aaPredicted RBP5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 TDRD15B5MCY1 1934 aaKnown RBP5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 STK36Q9NRP7 1315 aa5.2□□□□□ -1.58
HERPUD1-213ENST00000568358 XIRP2A4UGR9 3374 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 IGKV6-21A0A0C4DH24 114 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 M0R2N6 131 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 FSCN2O14926 492 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 SLC37A4O43826 429 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ZNF623O75123 536 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ZC3H11AO75152 810 aaKnown RBP eCLIP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 TBX10O75333 385 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ATF7P17544 494 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PHKA2P46019 1235 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 NEK4P51957 841 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 AK2P54819 239 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 NPEPPSP55786 919 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 BCAR1P56945 870 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 CLDN10P78369 228 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 DAB2P98082 770 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ITIH3Q06033 890 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LAMTOR4Q0VGL1 99 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 GNL2Q13823 731 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PCBP1Q15365 356 aaKnown RBP eCLIP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 CALCRLQ16602 461 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 DUSP6Q16828 381 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LONRF3Q496Y0 759 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 HERC4Q5GLZ8 1057 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 NOMO2Q5JPE7 1267 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PLA2G4FQ68DD2 849 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 DESI1Q6ICB0 168 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ANKRD54Q6NXT1 300 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LLGL2Q6P1M3 1020 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ELMSAN1Q6PJG2 1045 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 TMEM184AQ6ZMB5 413 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LRRC55Q6ZSA7 311 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 ANO5Q75V66 913 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 DDX53Q86TM3 631 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PACS2Q86VP3 889 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PPFIBP1Q86W92 1011 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 C4orf19Q8IY42 314 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 VPS52Q8N1B4 723 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 DEPDC4Q8N2C3 294 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LINC01465Q8N7H1 131 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MRPL43Q8N983 215 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 CNNM3Q8NE01 707 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PRPF31Q8WWY3 499 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 EDAQ92838 391 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MSLNLQ96KJ4 702 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MBOAT7Q96N66 472 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 NECTIN4Q96NY8 510 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MTRQ99707 1265 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 SH2D3AQ9BRG2 576 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 LXNQ9BS40 222 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 EMILIN2Q9BXX0 1053 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 IRX2Q9BZI1 471 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 TRIM6Q9C030 488 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 OSBPL2Q9H1P3 480 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 KCNH6Q9H252 994 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 CCSER2Q9H7U1 834 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 FAM105AQ9NUU6 356 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 CLEC1BQ9P126 229 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MUTYHQ9UIF7 546 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 TPCN1Q9ULQ1 816 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 BARX2Q9UMQ3 279 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 SSX2IPQ9Y2D8 614 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 INPP5FQ9Y2H2 1132 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 USP15Q9Y4E8 981 aaPredicted RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 PCDHB2Q9Y5E7 798 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 COL4A3BPQ9Y5P4 624 aa5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 MTCL1Q9Y4B5 1905 aaKnown RBP5.19□□□□□ -1.58
HERPUD1-213ENST00000568358 BDP1A6H8Y1 2624 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 MUC3AQ02505 3323 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 TMEM150BA6NC51 233 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 NT5C1B-RDH14C9J2C7 533 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 C3orf80F5H4A9 247 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 EML1O00423 815 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 EDIL3O43854 480 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 PRPF40AO75400 957 aaKnown RBP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 OFD1O75665 1012 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 DGAT1O75907 488 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 STBD1O95210 358 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 XRCC6P12956 609 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 ITGA4P13612 1032 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 KLRC2P26717 231 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 AXLP30530 894 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 TXKP42681 527 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 MTHFRP42898 656 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 GUCA2AQ02747 115 aa5.18□□□□□ -1.58
HERPUD1-213ENST00000568358 DRP2Q13474 957 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms