RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 PKD1L2Q7Z442 2459 aa9.21□□□□□ -0.93
CCDC33-209ENST00000560565 SPDYE16A6NNV3 312 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 BHMG1C9JSJ3 638 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 PIK3CDO00329 1044 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 RGS16O15492 202 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 CEP104O60308 925 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 PPP1R11O60927 126 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 ATP6V1G2O95670 118 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 LMNAP02545 664 aaKnown RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 TFRCP02786 760 aaKnown RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 H2AFZP0C0S5 128 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 RASSF2P50749 326 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 OAZ1P54368 228 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 UBXN2AP68543 259 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 GFPT1Q06210 699 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 IRF5Q13568 498 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 RAPGEF1Q13905 1077 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 ZNF268Q14587 947 aaPredicted RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 HGSNATQ68CP4 663 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 MOXD1Q6UVY6 613 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 H2AFVQ71UI9 128 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 TMC3Q7Z5M5 1100 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 SH2D3CQ8N5H7 860 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 UBL4BQ8N7F7 174 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 MAIP1Q8WWC4 291 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 PIK3R5Q8WYR1 880 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 RAD54LQ92698 747 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 TLCD1Q96CP7 247 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 SH3GL3Q99963 347 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 LSM14BQ9BX40 385 aaKnown RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 EHMT1Q9H9B1 1298 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 HAUS2Q9NVX0 235 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 BCCIPQ9P287 314 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 GJD2Q9UKL4 321 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 MTUS1Q9ULD2 1270 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 SLC12A4Q9UP95 1085 aa9.21□□□□□ -0.94
CCDC33-209ENST00000560565 MRPL11Q9Y3B7 192 aaKnown RBP9.21□□□□□ -0.94
CCDC33-209ENST00000560565 PLXNA1Q9UIW2 1896 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 F8VZ95 297 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 H0YGN5 161 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 BUB1O43683 1085 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 MARCH6O60337 910 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 EVI5O60447 810 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CNMDO75829 334 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 ICAM1P05362 532 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 ELNP15502 786 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CHRNA3P32297 505 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CXCR5P32302 372 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 DSG3P32926 999 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 MAGOHP61326 146 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 SARNPP82979 210 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 GHRHRQ02643 423 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CAV1Q03135 178 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CCDC15Q0P6D6 951 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 NAA25Q14CX7 972 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 RBBP5Q15291 538 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PPP1R7Q15435 360 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 INF2Q27J81 1249 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CMPK2Q5EBM0 449 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 SPDYAQ5MJ70 313 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 FAM26FQ5R3K3 315 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 WDR78Q5VTH9 848 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 SAMD1Q6SPF0 538 aaPredicted RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 LRRC55Q6ZSA7 311 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 STXBP4Q6ZWJ1 553 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PLEKHH3Q7Z736 793 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 RHOT2Q8IXI1 618 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 LMNTD2Q8IXW0 634 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 ZC3H3Q8IXZ2 948 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 KIAA0895Q8NCT3 520 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 ERMNQ8TAM6 284 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 FBF1Q8TES7 1133 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 ATXN2LQ8WWM7 1075 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 RAPGEF5Q92565 580 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 TBC1D5Q92609 795 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 MAGOHBQ96A72 148 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PORCNQ9H237 461 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PABPC3Q9H361 631 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PPCSQ9HAB8 311 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 NOD2Q9HC29 1040 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 CD248Q9HCU0 757 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 TXLNGQ9NUQ3 528 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 INTS9Q9NV88 658 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 BTBD7Q9P203 1132 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 PPP1R9AQ9ULJ8 1098 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
CCDC33-209ENST00000560565 NFS1Q9Y697 457 aa9.2□□□□□ -0.94
CCDC33-209ENST00000560565 LCTP09848 1927 aa9.19□□□□□ -0.94
CCDC33-209ENST00000560565 ATP2A1O14983 1001 aa9.19□□□□□ -0.94
CCDC33-209ENST00000560565 ZBED4O75132 1171 aa9.19□□□□□ -0.94
CCDC33-209ENST00000560565 NEBLO76041 1014 aa9.19□□□□□ -0.94
CCDC33-209ENST00000560565 AFPP02771 609 aaKnown RBP9.19□□□□□ -0.94
CCDC33-209ENST00000560565 MMEP08473 750 aa9.19□□□□□ -0.94
CCDC33-209ENST00000560565 CCL5P13501 91 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms