RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 GAD1Q99259 594 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 NELL2Q99435 816 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 KXD1Q9BQD3 176 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 FAM126AQ9BYI3 521 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 ZMYND12Q9H0C1 365 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 RNF39Q9H2S5 420 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
RABGGTA-217ENST00000560521 ARL5CA6NH57 179 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 SLC27A2O14975 620 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 NCAM2O15394 837 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 CDC27P30260 824 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 SFNP31947 248 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 PFKPQ01813 784 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 RTN1Q16799 776 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 USP41Q3LFD5 358 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 POTEHQ6S545 545 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 PRSS55Q6UWB4 352 aaPredicted RBP10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 SYNE3Q6ZMZ3 975 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 TPRG1Q6ZUI0 275 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 GPR65Q8IYL9 337 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 RIT2Q99578 217 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 PLA2G2FQ9BZM2 168 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 FBXW11Q9UKB1 542 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 IPPQ9Y573 584 aa10.03□□□□□ -0.8
RABGGTA-217ENST00000560521 ATRXP46100 2492 aa10.02□□□□□ -0.8
RABGGTA-217ENST00000560521 ESYT2A0FGR8 921 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 CCL16O15467 120 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 GDF9O60383 454 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 GAS7O60861 476 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 PSMD10O75832 226 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 SRGAP2CP0DJJ0 459 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ITGA4P13612 1032 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 HOXB3P14651 431 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 MLH1P40692 756 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 SCNN1GP51170 649 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 JAK3P52333 1124 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 AAMPQ13685 434 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 NECTIN1Q15223 517 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 LAIR1Q6GTX8 287 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 B3GNT9Q6UX72 402 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 MAMSTRQ6ZN01 415 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ANO5Q75V66 913 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 MIER3Q7Z3K6 550 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 SRGAP1Q7Z6B7 1085 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 REXO1Q8N1G1 1221 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 CELF5Q8N6W0 485 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 GSTCDQ8NEC7 633 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 PHF20Q9BVI0 1012 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 COLEC11Q9BWP8 271 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 TEKT3Q9BXF9 490 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 EIF2AQ9BY44 585 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 LSG1Q9H089 658 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 UBN1Q9NPG3 1134 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 HEBP1Q9NRV9 189 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 SEMA4GQ9NTN9 838 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ANGPTL2Q9UKU9 493 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 COL4A3BPQ9Y5P4 624 aa10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 ZNF638Q14966 1978 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-217ENST00000560521 FRYQ5TBA9 3013 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 ZBTB43O43298 467 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 LRP3O75074 770 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 RETP07949 1114 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 HNRNPA1P09651 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 PMLP29590 882 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 EXOSC10Q01780 885 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 ADCY1Q08828 1119 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 CSRP2Q16527 193 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 RTP2Q5QGT7 225 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 N4BP2L1Q5TBK1 243 aaPredicted RBP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 LRCH2Q5VUJ6 765 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 CREB3L3Q68CJ9 461 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 PLA2G4FQ68DD2 849 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 ZNF852Q6ZMS4 543 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 PRR23CQ6ZRP0 262 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 PRR23BQ6ZRT6 265 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 CNNM3Q8NE01 707 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 RDM1Q8NG50 284 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 PRPF31Q8WWY3 499 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 CCDC136Q96JN2 1154 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 C6orf50Q9HD87 102 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 HCFC1R1Q9NWW0 138 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 DNMT3BQ9UBC3 853 aaKnown RBP10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 ADAM28Q9UKQ2 775 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 RAB23Q9ULC3 237 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 HES2Q9Y543 173 aa10.01□□□□□ -0.81
RABGGTA-217ENST00000560521 DENND4CQ5VZ89 1909 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 NR1I2O75469 434 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 ECI2O75521 394 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 C8AP07357 584 aa10□□□□□ -0.81
RABGGTA-217ENST00000560521 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms