RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SOD2P04179 222 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 ATP2C1P98194 919 aaPredicted RBP22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 ITIH3Q06033 890 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 PRPF4BQ13523 1007 aaKnown RBP22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 PPFIBP1Q86W92 1011 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 RPGRIP1Q96KN7 1286 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 MMTAG2Q9BU76 263 aaKnown RBP22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 ADAM7Q9H2U9 754 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 PDZD7Q9H5P4 517 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 POLD4Q9HCU8 107 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 DZANK1Q9NVP4 752 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 PARP2Q9UGN5 583 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 SMC3Q9UQE7 1217 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 TRIOO75962 3097 aa22.59■■□□□ 1.21
CHRNA3-207ENST00000559941 MYH11P35749 1972 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 TRIP11Q15643 1979 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 NR1I2O75469 434 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 EFEMP2O95967 443 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 EPCAMP16422 314 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 CDC25AP30304 524 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 CES5AQ6NT32 575 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 KLHL5Q96PQ7 755 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 HERC2P3Q9BVR0 1158 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 EMILIN2Q9BXX0 1053 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 MRPL17Q9NRX2 175 aaKnown RBP22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 KLK14Q9P0G3 267 aa22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 DAXXQ9UER7 740 aaPredicted RBP22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.58■■□□□ 1.21
CHRNA3-207ENST00000559941 EDN1P05305 212 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 SSBP05455 408 aaKnown RBP eCLIP22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 EFNA5P52803 228 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 GRIK3Q13003 919 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 TMEM132AQ24JP5 1023 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 RNF168Q8IYW5 571 aaPredicted RBP22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 KIFC3Q9BVG8 833 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 COLEC11Q9BWP8 271 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 SSX2IPQ9Y2D8 614 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 TECTAO75443 2155 aa22.57■■□□□ 1.2
CHRNA3-207ENST00000559941 CNPP09543 421 aaKnown RBP22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 LIG1P18858 919 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 LARP1BQ659C4 914 aaKnown RBP22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 TAS1R1Q7RTX1 841 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 NECTIN4Q96NY8 510 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 RPS6KC1Q96S38 1066 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 ADPGKQ9BRR6 497 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 SNTG2Q9NY99 539 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 CDH22Q9UJ99 828 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 USP20Q9Y2K6 914 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 MYO10Q9HD67 2058 aa22.56■■□□□ 1.2
CHRNA3-207ENST00000559941 F8W810 466 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 URODP06132 367 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 KLRC2P26717 231 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 MTHFRP42898 656 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 CLCN4P51793 760 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 HYIQ5T013 277 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 RARS2Q5T160 578 aaKnown RBP22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 EEF1DP3Q658K8 133 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 ARL6IP4Q66PJ3 421 aaKnown RBP22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 RINT1Q6NUQ1 792 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 KCNK18Q7Z418 384 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 KCTD17Q8N5Z5 321 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 C12orf76Q8N812 135 aaPredicted RBP22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 EDAQ92838 391 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 PLXNA3P51805 1871 aa22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 MTCL1Q9Y4B5 1905 aaKnown RBP22.55■■□□□ 1.2
CHRNA3-207ENST00000559941 K7ERI5 159 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 NT5DC1Q5TFE4 455 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 KIAA0319Q5VV43 1072 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 C1orf186Q6ZWK4 172 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 DAW1Q8N136 415 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 FBXL18Q96ME1 805 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 RIPOR3Q96MK2 946 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 POMKQ9H5K3 350 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 CHST7Q9NS84 486 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 HCN4Q9Y3Q4 1203 aa22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 ARIH1Q9Y4X5 557 aaPredicted RBP22.54■■□□□ 1.2
CHRNA3-207ENST00000559941 C2orf16Q68DN1 1984 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 C2CD2LO14523 706 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 HIP1RO75146 1068 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 NPTX2P47972 431 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 GLUD2P49448 558 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 PEX3P56589 373 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 DSG1Q02413 1049 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 TUSC3Q13454 348 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 DCAF4L1Q3SXM0 396 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 ATF7IP2Q5U623 682 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 KIAA1841Q6NSI8 718 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 KANK3Q6NY19 840 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 CABP7Q86V35 215 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 PNMA5Q96PV4 448 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 RUSC1Q9BVN2 902 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 TMEM134Q9H6X4 195 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 RXFP1Q9HBX9 757 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 ADAM28Q9UKQ2 775 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 NR2E1Q9Y466 385 aa22.53■■□□□ 1.2
CHRNA3-207ENST00000559941 DENND4AQ7Z401 1863 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 VWA3AA6NCI4 1184 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 CCDC169A6NNP5 214 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 RECQL4O94761 1208 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 MAPK7Q13164 816 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms