RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 PLS3P13797 630 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 RASA1P20936 1047 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 POLD1P28340 1107 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 SOX5P35711 763 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 STRN3Q13033 797 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 DAB2IPQ5VWQ8 1189 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ACTRT1Q8TDG2 376 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 NUP85Q9BW27 656 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ANKRD2Q9GZV1 360 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 CDC42EP4Q9H3Q1 356 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ANAPC4Q9UJX5 808 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 FOXN3O00409 490 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ENTPD5O75356 428 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 AKR1B1P15121 316 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 EPHB2P29323 1055 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 FAM182AQ5T1J6 154 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 NT5DC3Q86UY8 548 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ADGRF4Q8IZF3 695 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 MAML1Q92585 1016 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 P3H4Q92791 437 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 TTC17Q96AE7 1141 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 EDEM3Q9BZQ6 932 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ZFATQ9P243 1243 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ZBTB39O15060 712 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 MAPK13O15264 365 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 CYP26A1O43174 497 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 MED24O75448 989 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 DPEP1P16444 411 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 RFC5P40937 340 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 TGFB2P61812 414 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 CPNE8Q86YQ8 564 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 CD302Q8IX05 232 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 RNF217Q8TC41 542 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ABTB1Q969K4 478 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 SLCO1B3Q9NPD5 702 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 ZFP69BQ9UJL9 534 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 MYH6P13533 1939 aa11.66□□□□□ -0.54
CCDC85C-207ENST00000557769 MYO3BQ8WXR4 1341 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 GYG2O15488 501 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 PPFIA2O75334 1257 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 GDF11O95390 407 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 TROVE2P10155 538 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 CYP11B2P19099 503 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 SERPINB4P48594 390 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 NCALDP61601 193 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 GRIK5Q16478 980 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 ANKRD35Q8N283 1001 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 MREGQ8N565 214 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 ALG3Q92685 438 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 RUSC1Q9BVN2 902 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 ANO3Q9BYT9 981 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 INTS2Q9H0H0 1204 aaKnown RBP11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 SUCLA2Q9P2R7 463 aaPredicted RBP11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 SLC4A7Q9Y6M7 1214 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 IRS2Q9Y4H2 1338 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 TCRBV7S2A1N4TA0A589 114 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 XRCC4Q13426 336 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 STYK1Q6J9G0 422 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 CROCCP2Q86T23 111 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 CRAMP1Q96RY5 1269 aa11.65□□□□□ -0.54
CCDC85C-207ENST00000557769 SNX3O60493 162 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 GAS7O60861 476 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 RWDD2BP57060 319 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 PPP2R5EQ16537 467 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 DOK7Q18PE1 504 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 GBP7Q8N8V2 638 aaPredicted RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 ZNF564Q8TBZ8 553 aaPredicted RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 SCFD2Q8WU76 684 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 DNAJC9Q8WXX5 260 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 ACSF2Q96CM8 615 aaPredicted RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 FAM84AQ96KN4 292 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 SMYD3Q9H7B4 428 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 BATF3Q9NR55 127 aa11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 PAPOLBQ9NRJ5 636 aaKnown RBP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.55
CCDC85C-207ENST00000557769 FLT1P17948 1338 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CCDC195A0A1B0GUA6 201 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 PODXLO00592 558 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CD58P19256 250 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 CHRNA3P32297 505 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 ITGA8P53708 1063 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 PALB2Q86YC2 1186 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 TTC8Q8TAM2 541 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 MARCOQ9UEW3 520 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 SBF1O95248 1867 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 PHF2O75151 1096 aa11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 ESRRAP11474 423 aaPredicted RBP11.64□□□□□ -0.55
CCDC85C-207ENST00000557769 NPR1P16066 1061 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms