RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 ADGRF4Q8IZF3 695 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 MAGEC3Q8TD91 643 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PGM2Q96G03 612 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CLPTM1LQ96KA5 538 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 INTS2Q9H0H0 1204 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 RXFP1Q9HBX9 757 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 KCNMB3Q9NPA1 279 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 MARCOQ9UEW3 520 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 KCNQ2O43526 872 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PECAM1P16284 738 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 COILP38432 576 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 NEK3P51956 506 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 RPS8P62241 208 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 NFIXQ14938 502 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 EFTUD2Q15029 972 aaKnown RBP eCLIP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 ZYXQ15942 572 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 SEPT7Q16181 437 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PROM2Q8N271 834 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 UBL4BQ8N7F7 174 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 IQCDQ96DY2 449 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PHF12Q96QT6 1004 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 MTA3Q9BTC8 594 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 NUP85Q9BW27 656 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 RNPEPL1Q9HAU8 725 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PHTF1Q9UMS5 762 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 TMEM94Q12767 1356 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PASKQ96RG2 1323 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CCDC160A6NGH7 325 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CAPN9O14815 690 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 SORBS3O60504 671 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CD58P19256 250 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 SP100P23497 879 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PEX5P50542 639 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 RPS6KA3P51812 740 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 NOP14P78316 857 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 MYL7Q01449 175 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PPATQ06203 517 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 TSNAXIP1Q2TAA8 658 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 TMEM119Q4V9L6 283 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 LMBRD2Q68DH5 695 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CRELD2Q6UXH1 353 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 TTC7BQ86TV6 843 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 COL23A1Q86Y22 540 aaPredicted RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CCHCR1Q8TD31 782 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CEP63Q96MT8 703 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 TAOK3Q9H2K8 898 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 ARHGEF3Q9NR81 526 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 ANAPC5Q9UJX4 755 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 DDX60Q8IY21 1712 aaKnown RBP9.5□□□□□ -0.89
SYNE2-217ENST00000555022 CAMTA1Q9Y6Y1 1673 aa9.5□□□□□ -0.89
SYNE2-217ENST00000555022 LTBP4Q8N2S1 1624 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 A0A1W2PPM1 405 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TMEM150BA6NC51 233 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TXNDC9O14530 226 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 NVLO15381 856 aaKnown RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TPBGLP0DKB5 382 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 ZBTB48P10074 688 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KITP10721 976 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KRT5P13647 590 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 FERP16591 822 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TAC1P20366 129 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 RWDD2BP57060 319 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KLC1Q07866 573 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 GIT2Q14161 759 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 HHATQ5VTY9 493 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 NBPF5PQ86XG9 351 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 VPS52Q8N1B4 723 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 RASGEF1CQ8N431 466 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 SHKBP1Q8TBC3 707 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 SYN2Q92777 582 aaPredicted RBP9.49□□□□□ -0.89
SYNE2-217ENST00000555022 P3H4Q92791 437 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 MCUR1Q96AQ8 359 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 FGD4Q96M96 766 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 TXLNGYQ9BZA5 131 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 DNAJC18Q9H819 358 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 AAASQ9NRG9 546 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 DNM3Q9UQ16 869 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 KAT6AQ92794 2004 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CASZ1Q86V15 1759 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 ASTN1O14525 1302 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 EXOC1LA0A1B0GW35 172 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CAMTA2O94983 1202 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 UNC5CO95185 931 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 NUDT17P0C025 328 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 ATF2P15336 505 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CALB2P22676 271 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 IRX4P78413 519 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 CFAP157Q5JU67 520 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 GBP5Q96PP8 586 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 PCDHB18PQ96TA0 734 aa9.49□□□□□ -0.89
SYNE2-217ENST00000555022 NINJ2Q9NZG7 142 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms