RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ZCWPW2Q504Y3 356 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 ARMCX5Q6P1M9 558 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 MRPL10Q7Z7H8 261 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 LINC01599Q8WXQ3 324 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 RSPH1Q8WYR4 309 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 POMGNT1Q8WZA1 660 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 HERVK_113Q902F9 699 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 P2RX5Q93086 422 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 TSG101Q99816 390 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 GDF15Q99988 308 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 SEMA6BQ9H3T3 888 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 ANKFY1Q9P2R3 1169 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 USP20Q9Y2K6 914 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
SPTLC2-203ENST00000554901 PDE4DIPQ5VU43 2346 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 OGTO15294 1046 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 RPL13P26373 211 aaKnown RBP17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 ADSSP30520 456 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 MATR3P43243 847 aaKnown RBP eCLIP17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 EPHB4P54760 987 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 TYRO3Q06418 890 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 PGBD4Q96DM1 585 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 ZBTB45Q96K62 511 aaPredicted RBP17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 KIAA1586Q9HCI6 787 aa17.96■□□□□ 0.47
SPTLC2-203ENST00000554901 SYCE3A1L190 88 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 NPTXRO95502 500 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 GRM5P41594 1212 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 CDR2LQ86X02 465 aaPredicted RBP17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 ECHDC2Q86YB7 292 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 FUCA2Q9BTY2 467 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 EIF2AQ9BY44 585 aaKnown RBP17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 IKZF4Q9H2S9 585 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 UBN1Q9NPG3 1134 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 TMEM161AQ9NX61 479 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 RWDD2AQ9UIY3 292 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 AGO2Q9UKV8 859 aaKnown RBP17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 IPPQ9Y573 584 aa17.95■□□□□ 0.46
SPTLC2-203ENST00000554901 TISP43B9A030 160 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 CAVIN2O95810 425 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 AMHP03971 560 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 STAG3L1P0CL83 205 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 BMP8BP34820 402 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 KCNJ6P48051 423 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 WDR5P61964 334 aaKnown RBP17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 RASIP1Q5U651 963 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 ZBTB33Q86T24 672 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 ZNF598Q86UK7 904 aaKnown RBP17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 NPAS4Q8IUM7 802 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 NELFBQ8WX92 580 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 CBWD1Q9BRT8 395 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 CCDC94Q9BW85 323 aaPredicted RBP17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 HAPLN2Q9GZV7 340 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 DMAC2Q9NW81 257 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 HSPBP1Q9NZL4 362 aa17.94■□□□□ 0.46
SPTLC2-203ENST00000554901 MICAL3Q7RTP6 2002 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 HOXA2O43364 376 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 FAM189A1O60320 539 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 NR3C1P04150 777 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 CLTAP09496 248 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 FKBP3Q00688 224 aaKnown RBP17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 KLHL10Q6JEL2 608 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 CRIPAKQ8N1N5 446 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 GPD1LQ8N335 351 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 XXYLT1Q8NBI6 393 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 SMG8Q8ND04 991 aaKnown RBP17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 PHOSPHO2Q8TCD6 241 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 FBXL18Q96ME1 805 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 CTNND2Q9UQB3 1225 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 EXTL3O43909 919 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 ANKRD40Q6AI12 368 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 TTI2Q6NXR4 508 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 ZC3H3Q8IXZ2 948 aaKnown RBP17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 TOP1MTQ969P6 601 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 UBE2OQ9C0C9 1292 aaKnown RBP17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 TOPORSQ9NS56 1045 aaPredicted RBP17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 GIT1Q9Y2X7 761 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 PCDHB7Q9Y5E2 793 aa17.93■□□□□ 0.46
SPTLC2-203ENST00000554901 TTC3P53804 2025 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 CETN3O15182 167 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 CLIC2O15247 247 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 MAPK13O15264 365 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 FGFR1OPO95684 399 aaKnown RBP17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 ITGA4P13612 1032 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 ATF7P17544 494 aaPredicted RBP17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 NR2F2P24468 414 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 ADAM9Q13443 819 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.92■□□□□ 0.466e-11■■■■■ 35.6
SPTLC2-203ENST00000554901 THNSL1Q8IYQ7 743 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 CEP63Q96MT8 703 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 ACAP3Q96P50 834 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 MKNK1Q9BUB5 465 aa17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 NXF3Q9H4D5 531 aaKnown RBP17.92■□□□□ 0.46
SPTLC2-203ENST00000554901 PLEKHA5Q9HAU0 1116 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms