RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 LY9Q9HBG7 655 aa18.97■□□□□ 0.63
NEK9-204ENST00000554258 PRG3Q9Y2Y8 225 aaPredicted RBP18.97■□□□□ 0.63
NEK9-204ENST00000554258 CSDE1O75534 798 aaKnown RBP18.96■□□□□ 0.63
NEK9-204ENST00000554258 CCNE2O96020 404 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 ATP4AP20648 1035 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 UBE2SQ16763 222 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 SWSAP1Q6NVH7 229 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 ITFG1Q8TB96 612 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 NLRP7Q8WX94 980 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 SENP2Q9HC62 589 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 FAM105AQ9NUU6 356 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 CEP131Q9UPN4 1083 aa18.96■□□□□ 0.63
NEK9-204ENST00000554258 ERICH2A1L162 156 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 RAB27AP51159 221 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 EVCP57679 992 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 DSG1Q02413 1049 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 RABEP1Q15276 862 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 MIS18BP1Q6P0N0 1132 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 Q6ZUG5 572 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 PDZD3Q86UT5 571 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 DNASE1L2Q92874 299 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 RRP36Q96EU6 259 aaKnown RBP18.95■□□□□ 0.62
NEK9-204ENST00000554258 TCEANC2Q96MN5 208 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 LRRC2Q9BYS8 371 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 AGO4Q9HCK5 861 aaKnown RBP18.95■□□□□ 0.62
NEK9-204ENST00000554258 MARCH5Q9NX47 278 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 PCDHA6Q9UN73 950 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 PCDHA8Q9Y5H6 950 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 WDR81Q562E7 1941 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 NOTCH4Q99466 2003 aa18.95■□□□□ 0.62
NEK9-204ENST00000554258 EIF4E1BA6NMX2 242 aaKnown RBP18.94■□□□□ 0.62
NEK9-204ENST00000554258 ECI2O75521 394 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 LILRA6Q6PI73 481 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 LINC01465Q8N7H1 131 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 PGBD4Q96DM1 585 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 LOXL4Q96JB6 756 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 SMOC1Q9H4F8 434 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.94■□□□□ 0.62
NEK9-204ENST00000554258 PDRG1Q9NUG6 133 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 KANSL3Q9P2N6 904 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 SEC63Q9UGP8 760 aaKnown RBP18.94■□□□□ 0.62
NEK9-204ENST00000554258 POLIQ9UNA4 740 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 PIN4Q9Y237 131 aaKnown RBP18.94■□□□□ 0.62
NEK9-204ENST00000554258 TICRRQ7Z2Z1 1910 aa18.94■□□□□ 0.62
NEK9-204ENST00000554258 ZNF623O75123 536 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 EPN2O95208 641 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 NEK4P51957 841 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 TOB2Q14106 344 aaPredicted RBP18.93■□□□□ 0.62
NEK9-204ENST00000554258 SH3PXD2AQ5TCZ1 1133 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 C19orf48Q6RUI8 117 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 NPAS3Q8IXF0 933 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 RNF168Q8IYW5 571 aaPredicted RBP18.93■□□□□ 0.62
NEK9-204ENST00000554258 SPEM1Q8N4L4 309 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 FAM3CQ92520 227 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 PLA2G2FQ9BZM2 168 aa18.93■□□□□ 0.62
NEK9-204ENST00000554258 POMCP01189 267 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 HNRNPA1P09651 372 aaKnown RBP eCLIP18.92■□□□□ 0.62
NEK9-204ENST00000554258 SFPQP23246 707 aaKnown RBP eCLIP18.92■□□□□ 0.62
NEK9-204ENST00000554258 OR1G1P47890 313 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 AFF1P51825 1210 aaKnown RBP18.92■□□□□ 0.62
NEK9-204ENST00000554258 TROAPQ12815 778 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 LIN9Q5TKA1 542 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 B3GALT6Q96L58 329 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 GCOM2Q9BZD3 368 aaPredicted RBP18.92■□□□□ 0.62
NEK9-204ENST00000554258 FNIP2Q9P278 1114 aa18.92■□□□□ 0.62
NEK9-204ENST00000554258 K7ESF4 209 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 CCL16O15467 120 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 XYLBO75191 536 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 RPL17P18621 184 aaKnown RBP18.91■□□□□ 0.62
NEK9-204ENST00000554258 GAS6Q14393 721 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 PPM1LQ5SGD2 360 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 AGMOQ6ZNB7 445 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 ING5Q8WYH8 240 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 MAP3K14Q99558 947 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 BRD9Q9H8M2 597 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 RSAD1Q9HA92 442 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 BRPF3Q9ULD4 1205 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 MAFBQ9Y5Q3 323 aaPredicted RBP18.91■□□□□ 0.62
NEK9-204ENST00000554258 ACACAQ13085 2346 aa18.91■□□□□ 0.62
NEK9-204ENST00000554258 ASXL3Q9C0F0 2248 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 TDRD15B5MCY1 1934 aaKnown RBP18.9■□□□□ 0.62
NEK9-204ENST00000554258 PAPSS2O95340 614 aaPredicted RBP18.9■□□□□ 0.62
NEK9-204ENST00000554258 RCAN1P53805 252 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 CEP55Q53EZ4 464 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 PLA2G2CQ5R387 149 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 DAB2IPQ5VWQ8 1189 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 BRF1Q92994 677 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 EDEM2Q9BV94 578 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 CHST7Q9NS84 486 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 FBXW11Q9UKB1 542 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 GPSM3Q9Y4H4 160 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 NEUROG3Q9Y4Z2 214 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 PCDHB2Q9Y5E7 798 aa18.9■□□□□ 0.62
NEK9-204ENST00000554258 C4orf47A7E2U8 309 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 DDAH1O94760 285 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 EFEMP2O95967 443 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 MPLP40238 635 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 CREMQ03060 361 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 ANKRD1Q15327 319 aa18.89■□□□□ 0.61
NEK9-204ENST00000554258 KIAA1211LQ6NV74 962 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms