RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PRKCEQ02156 737 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 DSG1Q02413 1049 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 RNASELQ05823 741 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 NR5A1Q13285 461 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 GNL2Q13823 731 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 SPECC1Q5M775 1068 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 TWF2Q6IBS0 349 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 B3GNT9Q6UX72 402 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 RSPO2Q6UXX9 243 aaPredicted RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 PIK3AP1Q6ZUJ8 805 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 TAS1R1Q7RTX1 841 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 TRMT1LQ7Z2T5 733 aaKnown RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 NEK8Q86SG6 692 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 NOSTRINQ8IVI9 506 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 RDM1Q8NG50 284 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 TBCKQ8TEA7 893 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 FDXACB1Q9BRP7 624 aaPredicted RBP8.62□□□□□ -1.03
ABCD4-220ENST00000553998 NT5C3AQ9H0P0 336 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 MARCH5Q9NX47 278 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 PCDHB2Q9Y5E7 798 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 PCDHGA2Q9Y5H1 932 aa8.62□□□□□ -1.03
ABCD4-220ENST00000553998 CHD6Q8TD26 2715 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 KANSL1LA0AUZ9 987 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 MSH4O15457 936 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 RFPL2O75678 378 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 GLUD1P00367 558 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 URODP06132 367 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 RFX1P22670 979 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 CYP3A7P24462 503 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 HOXA11P31270 313 aaPredicted RBP8.61□□□□□ -1.03
ABCD4-220ENST00000553998 DNM2P50570 870 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 FOSBP53539 338 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 GPC5P78333 572 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 PRKCQQ04759 706 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 DSC1Q08554 894 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 ORC2Q13416 577 aaPredicted RBP8.61□□□□□ -1.03
ABCD4-220ENST00000553998 UGCGQ16739 394 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 INF2Q27J81 1249 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 XKR3Q5GH77 459 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 PPP4R3AQ6IN85 833 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 COLGALT2Q8IYK4 626 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 URGCPQ8TCY9 931 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 SMG7Q92540 1137 aaKnown RBP8.61□□□□□ -1.03
ABCD4-220ENST00000553998 SLC5A5Q92911 643 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 MBOAT7Q96N66 472 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 SCLT1Q96NL6 688 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 HINFPQ9BQA5 517 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 RTKNQ9BST9 563 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 FOXQ1Q9C009 403 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 EPC1Q9H2F5 836 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 UBN1Q9NPG3 1134 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 FOXD4L1Q9NU39 408 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 AGPAT5Q9NUQ2 364 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 FNIP2Q9P278 1114 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 PIN4Q9Y237 131 aaKnown RBP8.61□□□□□ -1.03
ABCD4-220ENST00000553998 INPP5FQ9Y2H2 1132 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 SAMM50Q9Y512 469 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 NUMBLQ9Y6R0 609 aa8.61□□□□□ -1.03
ABCD4-220ENST00000553998 TGM5O43548 720 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 STX6O43752 255 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 GAS2O43903 313 aaKnown RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 TBC1D4O60343 1298 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 LRRN2O75325 713 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 PSMD10O75832 226 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 ADRB1P08588 477 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 NCLP19338 710 aaKnown RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 GLUD2P49448 558 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 JAK3P52333 1124 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 LMNB2Q03252 620 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 LONRF3Q496Y0 759 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 Q4G0T1 1027 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 PRR16Q569H4 304 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 UBXN11Q5T124 520 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 MCTP1Q6DN14 999 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 MAMSTRQ6ZN01 415 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 CATSPER4Q7RTX7 472 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 BRAPQ7Z569 592 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 CNNM3Q8NE01 707 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 FGF14Q92915 247 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 CLDN23Q96B33 292 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 FAM193BQ96PV7 902 aaPredicted RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 RPP25Q9BUL9 199 aaKnown RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 BCO2Q9BYV7 579 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 ZSCAN16Q9H4T2 348 aaPredicted RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 ZSCAN32Q9NX65 697 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 SUCLA2Q9P2R7 463 aaPredicted RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 TCEAL9Q9UHQ7 104 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
ABCD4-220ENST00000553998 MTMR6Q9Y217 621 aa8.6□□□□□ -1.03
ABCD4-220ENST00000553998 VPS37CA5D8V6 355 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms