RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 SLC5A5Q92911 643 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 GJA10Q969M2 543 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 FAM193BQ96PV7 902 aaPredicted RBP10.8□□□□□ -0.68
CHD8-205ENST00000553651 NELL2Q99435 816 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 KXD1Q9BQD3 176 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 PLA2G2FQ9BZM2 168 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHD8-205ENST00000553651 SEMA4GQ9NTN9 838 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 ANGPTL2Q9UKU9 493 aa10.8□□□□□ -0.68
CHD8-205ENST00000553651 TDRD15B5MCY1 1934 aaKnown RBP10.8□□□□□ -0.68
CHD8-205ENST00000553651 LAMA1P25391 3075 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 RALGAPA1Q6GYQ0 2036 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 ESYT2A0FGR8 921 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 PSMD10O75832 226 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 HNRNPA1P09651 372 aaKnown RBP eCLIP10.79□□□□□ -0.68
CHD8-205ENST00000553651 SCNN1GP51170 649 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 PFKPQ01813 784 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 CSRP2Q16527 193 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 XKR3Q5GH77 459 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
CHD8-205ENST00000553651 FUT10Q6P4F1 479 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 PRSS55Q6UWB4 352 aaPredicted RBP10.79□□□□□ -0.68
CHD8-205ENST00000553651 PRR23CQ6ZRP0 262 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 NPAS3Q8IXF0 933 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
CHD8-205ENST00000553651 GSTCDQ8NEC7 633 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 ZFP42Q96MM3 310 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 NLRP4Q96MN2 994 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 GAD1Q99259 594 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 RIT2Q99578 217 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 ZMYND12Q9H0C1 365 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 CHRDQ9H2X0 955 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 RWDD1Q9H446 243 aaPredicted RBP10.79□□□□□ -0.68
CHD8-205ENST00000553651 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
CHD8-205ENST00000553651 BRPF3Q9ULD4 1205 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 IPPQ9Y573 584 aa10.79□□□□□ -0.68
CHD8-205ENST00000553651 DSPP15924 2871 aaKnown RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 SLC27A2O14975 620 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 CHMP2AO43633 222 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 POU2F2P09086 479 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 CDC27P30260 824 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 HOXA9P31269 272 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 SFNP31947 248 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 MLH1P40692 756 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 DNM2P50570 870 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 JAK3P52333 1124 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 ADCY1Q08828 1119 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 USP41Q3LFD5 358 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 RTP2Q5QGT7 225 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 ANO5Q75V66 913 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 CLSTN3Q9BQT9 956 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 LSG1Q9H089 658 aaKnown RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 HEBP1Q9NRV9 189 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 RBM28Q9NW13 759 aaKnown RBP10.78□□□□□ -0.68
CHD8-205ENST00000553651 HCFC1R1Q9NWW0 138 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 TCEAL9Q9UHQ7 104 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 HES2Q9Y543 173 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 AKAP13Q12802 2813 aa10.78□□□□□ -0.68
CHD8-205ENST00000553651 SDK1Q7Z5N4 2213 aa10.77□□□□□ -0.68
CHD8-205ENST00000553651 NBEAQ8NFP9 2946 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 NRG2O14511 850 aaPredicted RBP10.77□□□□□ -0.69
CHD8-205ENST00000553651 NCAM2O15394 837 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 CCL16O15467 120 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 ADAM12O43184 909 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 HRO43593 1189 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 GAS7O60861 476 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 ECI2O75521 394 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 ITGA4P13612 1032 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 FCARP24071 287 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 GAS6Q14393 721 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 RTN1Q16799 776 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 ZNF852Q6ZMS4 543 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 SRGAP1Q7Z6B7 1085 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 REXO1Q8N1G1 1221 aaKnown RBP10.77□□□□□ -0.69
CHD8-205ENST00000553651 RDM1Q8NG50 284 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 RABGGTAQ92696 567 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 UBN1Q9NPG3 1134 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 DNMT3BQ9UBC3 853 aaKnown RBP10.77□□□□□ -0.69
CHD8-205ENST00000553651 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 COL4A3BPQ9Y5P4 624 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 VWA8A3KMH1 1905 aa10.77□□□□□ -0.69
CHD8-205ENST00000553651 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.69
CHD8-205ENST00000553651 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 PROS1P07225 676 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 C8AP07357 584 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 LIMK1P53667 647 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 NRLP54845 237 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 EXOSC10Q01780 885 aaKnown RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 CREMQ03060 361 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 DMWDQ09019 674 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 SRSF5Q13243 272 aaKnown RBP10.76□□□□□ -0.69
CHD8-205ENST00000553651 ACAP1Q15027 740 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 NECTIN1Q15223 517 aa10.76□□□□□ -0.69
CHD8-205ENST00000553651 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms