RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PRMT7Q9NVM4 692 aaPredicted RBP14.4□□□□□ -0.1
NPAS3-209ENST00000551008 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
NPAS3-209ENST00000551008 GIT1Q9Y2X7 761 aa14.4□□□□□ -0.1
NPAS3-209ENST00000551008 DOCK8Q8NF50 2099 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 LOC730098B7Z3J9 87 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 H3BQV1 296 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 ACKR2O00590 384 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 PTGESO14684 152 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 EPCAMP16422 314 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 SSTR3P32745 418 aaPredicted RBP14.39□□□□□ -0.11
NPAS3-209ENST00000551008 TMEM119Q4V9L6 283 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
NPAS3-209ENST00000551008 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 LRFN3Q9BTN0 628 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 APOL5Q9BWW9 433 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 C2orf40Q9H1Z8 148 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 UBN1Q9NPG3 1134 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 FAM50BQ9Y247 325 aa14.39□□□□□ -0.11
NPAS3-209ENST00000551008 PRG3Q9Y2Y8 225 aaPredicted RBP14.39□□□□□ -0.11
NPAS3-209ENST00000551008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.38□□□□□ -0.11
NPAS3-209ENST00000551008 VWA3AA6NCI4 1184 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 ABLIM1O14639 778 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 HIP1RO75146 1068 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 IGFBP6P24592 240 aaPredicted RBP14.38□□□□□ -0.11
NPAS3-209ENST00000551008 NPTX2P47972 431 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 SLC12A3P55017 1021 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 CBX2Q14781 532 aaPredicted RBP14.38□□□□□ -0.11
NPAS3-209ENST00000551008 MAPK6Q16659 721 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 KRT79Q5XKE5 535 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 ARL6IP4Q66PJ3 421 aaKnown RBP14.38□□□□□ -0.11
NPAS3-209ENST00000551008 ZBTB8OSQ8IWT0 167 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 RABGGTAQ92696 567 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 KIFAP3Q92845 792 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 PLIN2Q99541 437 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 HERC2P3Q9BVR0 1158 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 RAB34Q9BZG1 259 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 SNTG2Q9NY99 539 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 ARHGAP28Q9P2N2 729 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 FAN1Q9Y2M0 1017 aa14.38□□□□□ -0.11
NPAS3-209ENST00000551008 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.38□□□□□ -0.11
NPAS3-209ENST00000551008 FSD2A1L4K1 749 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 N4BP3O15049 544 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 MEFVO15553 781 aaPredicted RBP14.37□□□□□ -0.11
NPAS3-209ENST00000551008 RECQL4O94761 1208 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 ALDH2P05091 517 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 CNPP09543 421 aaKnown RBP14.37□□□□□ -0.11
NPAS3-209ENST00000551008 COL9A1P20849 921 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 OR1G1P47890 313 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 PEX3P56589 373 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 GRIK3Q13003 919 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 PRPF4BQ13523 1007 aaKnown RBP14.37□□□□□ -0.11
NPAS3-209ENST00000551008 PPP2R5AQ15172 486 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 RNF135Q8IUD6 432 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 C12orf76Q8N812 135 aaPredicted RBP14.37□□□□□ -0.11
NPAS3-209ENST00000551008 CEP120Q8N960 986 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 KLHL5Q96PQ7 755 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 C1QTNF1Q9BXJ1 281 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
NPAS3-209ENST00000551008 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 MUTYHQ9UIF7 546 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 DNM3Q9UQ16 869 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 STK24Q9Y6E0 443 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 MUC6Q6W4X9 2439 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 ANK1P16157 1881 aa14.37□□□□□ -0.11
NPAS3-209ENST00000551008 CARNS1A5YM72 827 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 GPR37L1O60883 481 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 SOD2P04179 222 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 SSBP05455 408 aaKnown RBP eCLIP14.36□□□□□ -0.11
NPAS3-209ENST00000551008 LIG1P18858 919 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 GUCY2CP25092 1073 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 NCBP1Q09161 790 aaKnown RBP14.36□□□□□ -0.11
NPAS3-209ENST00000551008 RESTQ13127 1097 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 PTPAQ15257 358 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 ARSHQ5FYA8 562 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 FAM173BQ6P4H8 233 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 SYT2Q8N9I0 419 aaPredicted RBP14.36□□□□□ -0.11
NPAS3-209ENST00000551008 CASP10Q92851 521 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 B3GALT6Q96L58 329 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
NPAS3-209ENST00000551008 PHF7Q9BWX1 381 aaPredicted RBP14.36□□□□□ -0.11
NPAS3-209ENST00000551008 GPR62Q9BZJ7 368 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 BLOC1S4Q9NUP1 217 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 PARP2Q9UGN5 583 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 PHLPP2Q6ZVD8 1323 aa14.36□□□□□ -0.11
NPAS3-209ENST00000551008 NPHP3-ACAD11A0A0J9YXS1 232 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 DCXO43602 365 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 WEE2P0C1S8 567 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 HOXB8P17481 243 aaPredicted RBP14.35□□□□□ -0.11
NPAS3-209ENST00000551008 PROZP22891 400 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 CLCN4P51793 760 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 EFNA5P52803 228 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
NPAS3-209ENST00000551008 ATF7IP2Q5U623 682 aa14.35□□□□□ -0.11
NPAS3-209ENST00000551008 USP49Q70CQ1 688 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms