RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PNOCQ13519 176 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 NOLC1Q14978 699 aaKnown RBP eCLIP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 EEF1DP3Q658K8 133 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 GLB1LQ6UWU2 654 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 HPS3Q969F9 1004 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 TIFAQ96CG3 184 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 GSDMAQ96QA5 445 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 TCHPQ9BT92 498 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 MRPL9Q9BYD2 267 aaKnown RBP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 FGFBP2Q9BYJ0 223 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 TMEM117Q9H0C3 514 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 CDT1Q9H211 546 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 NXF3Q9H4D5 531 aaKnown RBP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 RSAD1Q9HA92 442 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 RNF19AQ9NV58 838 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 RMND1Q9NWS8 449 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 ANKFY1Q9P2R3 1169 aa12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 YBX2Q9Y2T7 364 aaKnown RBP12.46□□□□□ -0.41
CALCOCO1-208ENST00000547988 CA3P07451 260 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 FGFR1P11362 822 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 MYOGP15173 224 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 MCL1Q07820 350 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 BTG3Q14201 252 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 BMT2Q1RMZ1 405 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SLFN12LQ6IEE8 588 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 AGMOQ6ZNB7 445 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SYCP3Q8IZU3 236 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 LRRC43Q8N309 656 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SPATA20Q8TB22 786 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 LPPQ93052 612 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 CASD1Q96PB1 797 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 NKX2-4Q9H2Z4 354 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SLC28A3Q9HAS3 691 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 SLC39A2Q9NP94 309 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 HES2Q9Y543 173 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 STYXL1Q9Y6J8 313 aa12.45□□□□□ -0.42
CALCOCO1-208ENST00000547988 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 TBKBP1A7MCY6 615 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 MEIS3P2A8K0S8 358 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 INPPL1O15357 1258 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 PRPF6O94906 941 aaKnown RBP12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 GRM5P41594 1212 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 MATR3P43243 847 aaKnown RBP eCLIP12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 GATMP50440 423 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 TAP1Q03518 808 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 KCNA1Q09470 495 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 STK4Q13043 487 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 KYAT1Q16773 422 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 SLC39A4Q6P5W5 647 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 FIBCD1Q8N539 461 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 KIAA0895Q8NCT3 520 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 GLIS3Q8NEA6 775 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 URGCPQ8TCY9 931 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 HELQQ8TDG4 1101 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZBTB45Q96K62 511 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 CCDC94Q9BW85 323 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 APOL6Q9BWW8 343 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 SNTG2Q9NY99 539 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 KANSL3Q9P2N6 904 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 RWDD3Q9Y3V2 267 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
CALCOCO1-208ENST00000547988 A0A0B4J269 797 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 ANKRD63C9JTQ0 380 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 OGTO15294 1046 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 OFD1O75665 1012 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 RECQL4O94761 1208 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 KIF20AO95235 890 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 GARTP22102 1010 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 AKAP5P24588 427 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 MLH1P40692 756 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 FXR1P51114 621 aaKnown RBP eCLIP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 KNOP1Q1ED39 458 aaKnown RBP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 NOMO2Q5JPE7 1267 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 ZNF697Q5TEC3 545 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 CLP1Q92989 425 aaKnown RBP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 SAMD11Q96NU1 681 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 MSTO1Q9BUK6 570 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 HAPLN2Q9GZV7 340 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 GBP3Q9H0R5 595 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 TOPORSQ9NS56 1045 aaPredicted RBP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 PARP2Q9UGN5 583 aa12.43□□□□□ -0.42
CALCOCO1-208ENST00000547988 CHD7Q9P2D1 2997 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms