RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 CDK7P50613 346 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 ITGA7Q13683 1181 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 WHAMMP3Q1A5X7 153 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 ASTE1Q2TB18 679 aaPredicted RBP17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 TCERG1LQ5VWI1 586 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 HS2ST1Q7LGA3 356 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 ANKRD33Q7Z3H0 272 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 GPR161Q8N6U8 529 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 AFG1LQ8WV93 481 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 RABGGTAQ92696 567 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 PLCB1Q9NQ66 1216 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 DCDC2CA8MYV0 355 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 ZEB2O60315 1214 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 SLC9A1P19634 815 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 PEX3P56589 373 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 AMPD2Q01433 879 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 EXOC3L4Q17RC7 722 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 TDRD12Q587J7 1177 aaKnown RBP17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 FAM160B1Q5W0V3 765 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 FAM186BQ8IYM0 893 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 BORCS6Q96GS4 357 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 GBP3Q9H0R5 595 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 XPNPEP1Q9NQW7 623 aa17.99■□□□□ 0.47
CHMP1A-204ENST00000547687 MACROD2A1Z1Q3 448 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 ACTN1P12814 892 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 MAGEA1P43355 309 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 CPT1AP50416 773 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 PURAQ00577 322 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 ARHGAP1Q07960 439 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 SECISBP2LQ93073 1101 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 SLC35C1Q96A29 364 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 TRPV6Q9H1D0 765 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 AZI2Q9H6S1 392 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 AIPL1Q9NZN9 384 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 EYSQ5T1H1 3165 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 TRIP12Q14669 1992 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 ENC1O14682 589 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 MAPTP10636 758 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 PON1P27169 355 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 RAPGEF1Q13905 1077 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 DPY19L2P1Q6NXN4 242 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 GBP6Q6ZN66 633 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 TRIM50Q86XT4 487 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 FAM126BQ8IXS8 530 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 GOLGA5Q8TBA6 731 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 GLG1Q92896 1179 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 LRCH3Q96II8 777 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 MKNK1Q9BUB5 465 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 NIFKQ9BYG3 293 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 EPC1Q9H2F5 836 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 ATP6V0A4Q9HBG4 840 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 AGPAT3Q9NRZ7 376 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 DMAC2Q9NW81 257 aa17.98■□□□□ 0.47
CHMP1A-204ENST00000547687 SLC16A4O15374 487 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 ATP1A1P05023 1023 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 RAG1P15918 1043 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 BMP8BP34820 402 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 CLCN6P51797 869 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 GFPT1Q06210 699 aaPredicted RBP17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 ASIC2Q16515 512 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 KLHDC7AQ5VTJ3 777 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 PAPD7Q5XG87 772 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 TRAPPC11Q7Z392 1133 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 HAUS6Q7Z4H7 955 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 MCPH1Q8NEM0 835 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 BSNDQ8WZ55 320 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 PPP1R12CQ9BZL4 782 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 NRBP2Q9NSY0 501 aa17.97■□□□□ 0.47
CHMP1A-204ENST00000547687 A6NJR5 290 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 LGR5O75473 907 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 GH1P01241 217 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 MARK3P27448 753 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 POLGP54098 1239 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 TUBB4BP68371 445 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 TDHQ8IZJ6 230 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 TXLNBQ8N3L3 684 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 HDAC6Q9UBN7 1215 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 FRMD4BQ9Y2L6 1034 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 GTPBP10A4D1E9 387 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 CCDC169A6NNP5 214 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 PJA2O43164 708 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 MMP3P08254 477 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 UCHL3P15374 230 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 NPTX2P47972 431 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 CYP2J2P51589 502 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 NCKAP1LP55160 1127 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 ARID5AQ03989 594 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 KLHL30Q0D2K2 578 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 DMP1Q13316 513 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 ALCAMQ13740 583 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 EMC2Q15006 297 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 FAM47CQ5HY64 1035 aa17.96■□□□□ 0.47
CHMP1A-204ENST00000547687 C9orf50Q5SZB4 431 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms