RNA–Protein interactions for RNA: ENST00000547476.5

TUBA1B-203, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-203ENST00000547476 FUT10Q6P4F1 479 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 ZNF713Q8N859 430 aaPredicted RBP13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 COLEC11Q9BWP8 271 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 UBN1Q9NPG3 1134 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 FASNP49327 2511 aaKnown RBP13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 ZFYVE26Q68DK2 2539 aa13.07□□□□□ -0.32
TUBA1B-203ENST00000547476 IGKV6-21A0A0C4DH24 114 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 CCL16O15467 120 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 XYLBO75191 536 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 C8AP07357 584 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 MLH1P40692 756 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 CCR3P51677 355 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 SMC5Q8IY18 1101 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 CHRDQ9H2X0 955 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 BARHL2Q9NY43 387 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
TUBA1B-203ENST00000547476 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 ARL5CA6NH57 179 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 SFNP31947 248 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 SCNN1GP51170 649 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 JAK3P52333 1124 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 NUCB1Q02818 461 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 DSC1Q08554 894 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 AAMPQ13685 434 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 UBXN11Q5T124 520 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 PRSS55Q6UWB4 352 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 NPAS3Q8IXF0 933 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 GPR65Q8IYL9 337 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 CNNM3Q8NE01 707 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 ING5Q8WYH8 240 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 GAD1Q99259 594 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 IER2Q9BTL4 223 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 NIFKQ9BYG3 293 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 LRRC2Q9BYS8 371 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 V9GY48 417 aaPredicted RBP13.05□□□□□ -0.32
TUBA1B-203ENST00000547476 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 GAS7O60861 476 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 MAFO75444 373 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 ECI2O75521 394 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 PABPC1LQ4VXU2 614 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 XKR3Q5GH77 459 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 SMG8Q8ND04 991 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 DNASE1L2Q92874 299 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 CEP89Q96ST8 783 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 IPPQ9Y573 584 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 RBM8AQ9Y5S9 174 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-203ENST00000547476 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 HRO43593 1189 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 HOXA9P31269 272 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 LIMK1P53667 647 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 SATB1Q01826 763 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 SRSF5Q13243 272 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 LRCH2Q5VUJ6 765 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 SRGAP1Q7Z6B7 1085 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 MCRS1Q96EZ8 462 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 JPH2Q9BR39 696 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 TEKT3Q9BXF9 490 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 PLA2G2FQ9BZM2 168 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 UNC45AQ9H3U1 944 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 BRD9Q9H8M2 597 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 LMAN1LQ9HAT1 526 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 HCFC1R1Q9NWW0 138 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 MIOSQ9NXC5 875 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 KCNH3Q9ULD8 1083 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 MRPS23Q9Y3D9 190 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 HES2Q9Y543 173 aa13.03□□□□□ -0.32
TUBA1B-203ENST00000547476 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.32
TUBA1B-203ENST00000547476 GREB1Q4ZG55 1949 aa13.02□□□□□ -0.32
TUBA1B-203ENST00000547476 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.33
TUBA1B-203ENST00000547476 CHURC1-FNTBB4DL54 471 aa13.02□□□□□ -0.33
TUBA1B-203ENST00000547476 MSH4O15457 936 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms