RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 PALB2Q86YC2 1186 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 ARHGEF26Q96DR7 871 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 TAOK3Q9H2K8 898 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 KLHL11Q9NVR0 708 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 COL18A1P39060 1754 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 M0R2N6 131 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 OPHN1O60890 802 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 EIF4BP23588 611 aaKnown RBP13.7□□□□□ -0.22
PDZD4-209ENST00000544474 PROM2Q8N271 834 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 SLC25A41Q8N5S1 370 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 C17orf50Q8WW18 174 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 RAD54LQ92698 747 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 PBKQ96KB5 322 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 RAB3IPQ96QF0 476 aaPredicted RBP13.7□□□□□ -0.22
PDZD4-209ENST00000544474 NT5C3AQ9H0P0 336 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 RASA4BC9J798 803 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 RASA4O43374 803 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 PENKP01210 267 aaPredicted RBP13.7□□□□□ -0.22
PDZD4-209ENST00000544474 CALB2P22676 271 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 DOK7Q18PE1 504 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 ASTE1Q2TB18 679 aaPredicted RBP13.7□□□□□ -0.22
PDZD4-209ENST00000544474 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 EYA3Q99504 573 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 NPHS2Q9NP85 383 aa13.7□□□□□ -0.22
PDZD4-209ENST00000544474 AJAP1Q9UKB5 411 aaPredicted RBP13.7□□□□□ -0.22
PDZD4-209ENST00000544474 ABCB11O95342 1321 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 DUOX1Q9NRD9 1551 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 C2orf71A6NGG8 1288 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 TMCC1O94876 653 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 ZNF76P36508 570 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 STMN2Q93045 179 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 MKL1Q969V6 931 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 CENPTQ96BT3 561 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
PDZD4-209ENST00000544474 PABPC3Q9H361 631 aaKnown RBP13.69□□□□□ -0.22
PDZD4-209ENST00000544474 MYH3P11055 1940 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 GNA14O95837 355 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 PRR16Q569H4 304 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 KCTD1Q719H9 257 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 EXOC3L1Q86VI1 746 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 SLC30A5Q8TAD4 765 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 ALG3Q92685 438 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
PDZD4-209ENST00000544474 RNPEPL1Q9HAU8 725 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
PDZD4-209ENST00000544474 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
PDZD4-209ENST00000544474 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 DDX39AO00148 427 aaKnown RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 CLDN3O15551 220 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 ZNF24P17028 368 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 ADCY7P51828 1080 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 ZC2HC1CQ53FD0 456 aaPredicted RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SH2D4BQ5SQS7 431 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SEL1L2Q5TEA6 688 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SFR1Q86XK3 245 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 PNMA5Q96PV4 448 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 LRRC37BQ96QE4 947 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SLX1AQ9BQ83 275 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SHCBP1LQ9BZQ2 653 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 IGSF9BQ9UPX0 1349 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 E7ENQ6 273 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 STK10O94804 968 aaKnown RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 MYBP10242 640 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 ACADSP16219 412 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 USP46P62068 366 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SLC35G1Q2M3R5 365 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SESTD1Q86VW0 696 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 CARD9Q9H257 536 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 GNAZP19086 355 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 CA4P22748 312 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 DRAP1Q14919 205 aaPredicted RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 C6orf118Q5T5N4 469 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 LRRC8CQ8TDW0 803 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 SYN2Q92777 582 aaPredicted RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 MYLK2Q9H1R3 596 aa13.68□□□□□ -0.22
PDZD4-209ENST00000544474 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
PDZD4-209ENST00000544474 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 WFS1O76024 890 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
PDZD4-209ENST00000544474 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 KITP10721 976 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 KCNA3P22001 575 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 RCN1Q15293 331 aa13.67□□□□□ -0.22
PDZD4-209ENST00000544474 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms