RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SLC13A1Q9BZW2 595 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 TUFT1Q9NNX1 390 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 ZNF302Q9NR11 478 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PSD3Q9NYI0 1048 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 SLC8A2Q9UPR5 921 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 PITPNM2Q9BZ72 1349 aa13.9□□□□□ -0.18
TNC-212ENST00000542877 MAP3K4Q9Y6R4 1608 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 TET3O43151 1660 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 KIF1CO43896 1103 aaKnown RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 GUCY1A2P33402 732 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 SLC26A7Q8TE54 656 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 STK33Q9BYT3 514 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 UVRAGQ9P2Y5 699 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 SLC26A4O43511 780 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 TYK2P29597 1187 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 AARSP49588 968 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNC-212ENST00000542877 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 HPCAL4Q9UM19 191 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 SNAP23O00161 211 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 PSMD14O00487 310 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 ITIH2P19823 946 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 LRRC31Q6UY01 552 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 PPCSQ9HAB8 311 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 POLD4Q9HCU8 107 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 PIK3R2O00459 728 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 CDH16O75309 829 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 SCP2P22307 547 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 PGM1P36871 562 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 HIC1Q14526 733 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 SRBD1Q8N5C6 995 aaKnown RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 TC2NQ8N9U0 490 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 IFT43Q96FT9 208 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 SLC24A3Q9HC58 644 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 NSUN2Q08J23 767 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNC-212ENST00000542877 RABL6Q3YEC7 729 aaPredicted RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 KRT27Q7Z3Y8 459 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 AGGF1Q8N302 714 aaeCLIP13.89□□□□□ -0.19
TNC-212ENST00000542877 ARMC2Q8NEN0 867 aa13.89□□□□□ -0.19
TNC-212ENST00000542877 FAM49AQ9H0Q0 323 aaPredicted RBP13.89□□□□□ -0.19
TNC-212ENST00000542877 CHN1P15882 459 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 KCNQ4P56696 695 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 RAVER2Q9HCJ3 691 aaKnown RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 GABBR1Q9UBS5 961 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 SLC4A7Q9Y6M7 1214 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 F5H6K3 240 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 KIAA0391O15091 583 aaKnown RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 FXR1P51114 621 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNC-212ENST00000542877 POU5F1BQ06416 359 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 KLRC3Q07444 240 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 EFHC2Q5JST6 749 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 ANGPTL8Q6UXH0 198 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 RCOR2Q8IZ40 523 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 TIPINQ9BVW5 301 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 CYP4F11Q9HBI6 524 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 USP15Q9Y4E8 981 aaPredicted RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 CACNB3P54284 484 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 HDAC4P56524 1084 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 ALKBH8Q96BT7 664 aaKnown RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 SGSM3Q96HU1 749 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 RBAKQ9NYW8 714 aaPredicted RBP13.88□□□□□ -0.19
TNC-212ENST00000542877 ANP32DO95626 131 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 SLC35G2Q8TBE7 412 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
TNC-212ENST00000542877 A0A1W2PQJ5 194 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 FAM102AQ5T9C2 384 aaPredicted RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 MTBPQ96DY7 904 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 MS4A14Q96JA4 679 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 CDH6P55285 790 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 SH2D3CQ8N5H7 860 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 SNX19Q92543 992 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 FOXP3Q9BZS1 431 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 APEX2Q9UBZ4 518 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 AGO2Q9UKV8 859 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 PNMA3Q9UL41 463 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 GALCP54803 685 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 CELF1Q92879 486 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.87□□□□□ -0.19
TNC-212ENST00000542877 NRKQ7Z2Y5 1582 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 CYP26A1O43174 497 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 FDX1P10109 184 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 AP1B1Q10567 949 aa13.87□□□□□ -0.19
TNC-212ENST00000542877 CAPRIN1Q14444 709 aaKnown RBP13.87□□□□□ -0.19
TNC-212ENST00000542877 IMPG1Q17R60 797 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms