RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 ABL1P00519 1130 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 TIMP1P01033 207 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 MYBL2P10244 700 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 CSF2RAP15509 400 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 CYP2C18P33260 490 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 MATR3P43243 847 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHFR-219ENST00000541341 USP11P51784 963 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 ZNF131P52739 623 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 CYP27A1Q02318 531 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 IFT88Q13099 833 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
CHFR-219ENST00000541341 CCDC85BQ15834 202 aaPredicted RBP11.23□□□□□ -0.61
CHFR-219ENST00000541341 ASIC2Q16515 512 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 TMEM63BQ5T3F8 832 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 C6orf118Q5T5N4 469 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 KCTD1Q719H9 257 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 C16orf59Q7L2K0 433 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 MYOCDQ8IZQ8 938 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 CCDC197Q8NCU1 140 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 KLHDC9Q8NEP7 349 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 PPP1R13LQ8WUF5 828 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 KAT2BQ92831 832 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 ARL8AQ96BM9 186 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 AGBL1Q96MI9 1066 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 METTL14Q9HCE5 456 aaKnown RBP11.23□□□□□ -0.61
CHFR-219ENST00000541341 RBM12Q9NTZ6 932 aaKnown RBP11.23□□□□□ -0.61
CHFR-219ENST00000541341 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHFR-219ENST00000541341 SUCLA2Q9P2R7 463 aaPredicted RBP11.23□□□□□ -0.61
CHFR-219ENST00000541341 CAPN6Q9Y6Q1 641 aa11.23□□□□□ -0.61
CHFR-219ENST00000541341 CHD9Q3L8U1 2897 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 DNAJC25-GNG10A0A024R161 153 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 TRIM49BA6NDI0 452 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 ZNF233A6NK53 670 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 LRRC53A6NM62 1247 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 LIN7AO14910 233 aaPredicted RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 DUSP11O75319 330 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 ZMYND10O75800 440 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 GGPS1O95749 300 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 ALAS1P13196 640 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 PLCG1P19174 1290 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 RPL13P26373 211 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 CASP1P29466 404 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 KLHL30Q0D2K2 578 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 UMODL1Q5DID0 1318 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 FBXW10Q5XX13 1052 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 FRMPD2Q68DX3 1309 aaPredicted RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 CCSAPQ6IQ19 270 aaPredicted RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 TTBK2Q6IQ55 1244 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 NFRKBQ6P4R8 1299 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 CYB5D1Q6P9G0 228 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 ANKRD33Q7Z3H0 272 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 TCP11Q8WWU5 503 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 LARP4BQ92615 738 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 STAMQ92783 540 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 TIFAQ96CG3 184 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 CHMP6Q96FZ7 201 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 PGM2Q96G03 612 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SYNGAP1Q96PV0 1343 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 TSEN34Q9BSV6 310 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 RANBP17Q9H2T7 1088 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 PRDM12Q9H4Q4 367 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 ZNF576Q9H609 170 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 CCDC134Q9H6E4 229 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SLC40A1Q9NP59 571 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 HOMER3Q9NSC5 361 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 MTRF1LQ9UGC7 380 aaKnown RBP11.22□□□□□ -0.61
CHFR-219ENST00000541341 TBX21Q9UL17 535 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 PCDHA6Q9UN73 950 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 MAPK8IP1Q9UQF2 711 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 SAMM50Q9Y512 469 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 PCDHA8Q9Y5H6 950 aa11.22□□□□□ -0.61
CHFR-219ENST00000541341 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHFR-219ENST00000541341 ASTN1O14525 1302 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.21□□□□□ -0.61
CHFR-219ENST00000541341 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.21□□□□□ -0.61
CHFR-219ENST00000541341 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 MOXD2PA6NHM9 499 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 PODXLO00592 558 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 PPP1R12AO14974 1030 aaPredicted RBP11.21□□□□□ -0.61
CHFR-219ENST00000541341 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 CETN3O15182 167 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 ATP5HO75947 161 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 COPB2P35606 906 aa11.21□□□□□ -0.61
CHFR-219ENST00000541341 PSMC6P62333 389 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms