RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 EIF3CLB5ME19 914 aaKnown RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 RGS16O15492 202 aaPredicted RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 MOCS2O96007 188 aaPredicted RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 SCP2P22307 547 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 NME3Q13232 169 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 ATF7IP2Q5U623 682 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 NOA1Q8NC60 698 aaKnown RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 TMEM35BQ8NCS4 154 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 MICAL1Q8TDZ2 1067 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 TSNARE1Q96NA8 513 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 EIF3CQ99613 913 aaKnown RBP10.22□□□□□ -0.77
TTC39C-203ENST00000540918 AGPAT1Q99943 283 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 SIK2Q9H0K1 926 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 MLXIPLQ9NP71 852 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 PDGFCQ9NRA1 345 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 NKIRAS1Q9NYS0 192 aa10.22□□□□□ -0.77
TTC39C-203ENST00000540918 HUS1O60921 280 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 SLC25A27O95847 323 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 INSRRP14616 1297 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 ATP2A2P16615 1042 aaKnown RBP10.21□□□□□ -0.77
TTC39C-203ENST00000540918 KCNJ1P48048 391 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
TTC39C-203ENST00000540918 MDM2Q00987 491 aaPredicted RBP10.21□□□□□ -0.77
TTC39C-203ENST00000540918 BRD3Q15059 726 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 FAM102AQ5T9C2 384 aaPredicted RBP10.21□□□□□ -0.77
TTC39C-203ENST00000540918 MFSD14CQ5VZR4 134 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 C4orf50Q6ZRC1 276 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 SMAP1Q8IYB5 467 aaPredicted RBP10.21□□□□□ -0.77
TTC39C-203ENST00000540918 SLC35G2Q8TBE7 412 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 KAT5Q92993 513 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 UBE4BO95155 1302 aa10.21□□□□□ -0.77
TTC39C-203ENST00000540918 ZRANB2O95218 330 aaKnown RBP eCLIP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 SUPT20HL2P0C7V6 817 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 ATXN8OSP0DMR3 200 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 MXRA7P84157 204 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 SMTNL2Q2TAL5 461 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 CYP4A22Q5TCH4 519 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 KLHDC7AQ5VTJ3 777 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 RWDD4Q6NW29 188 aaKnown RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 TRIM65Q6PJ69 517 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 EXOC8Q8IYI6 725 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 COG1Q8WTW3 980 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 LRRC1Q9BTT6 524 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 SDK1Q7Z5N4 2213 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 PFASO15067 1338 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 H3BRB1 525 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 EPHB6O15197 1021 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 XPOTO43592 962 aaKnown RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 CREB3O43889 395 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 PRPSAP2O60256 369 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 NPTXRO95502 500 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 TUBBP07437 444 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 YY1P25490 414 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 PON1P27169 355 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 ZC3H18Q86VM9 953 aaKnown RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 DDX42Q86XP3 938 aaKnown RBP eCLIP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 C10orf67Q8IYJ2 551 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 GPRASP2Q96D09 838 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 KLRG1Q96E93 195 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 MRPL47Q9HD33 250 aaKnown RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 PRG3Q9Y2Y8 225 aaPredicted RBP10.21□□□□□ -0.78
TTC39C-203ENST00000540918 CAPN6Q9Y6Q1 641 aa10.21□□□□□ -0.78
TTC39C-203ENST00000540918 EBAG9O00559 213 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 ITGB3P05106 788 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 BRD2P25440 801 aaKnown RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 SNX16P57768 344 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 NOP14P78316 857 aaKnown RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 SLC18A3Q16572 532 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 UGCGQ16739 394 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 EDRF1Q3B7T1 1238 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 BBS9Q3SYG4 887 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 DARS2Q6PI48 645 aaKnown RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 TATDN2Q93075 761 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 THOC1Q96FV9 657 aaKnown RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 ZFYVE28Q9HCC9 887 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 SPDYE16A6NNV3 312 aaPredicted RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 SGPL1O95470 568 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 FGRP09769 529 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 RAP1GAPP47736 663 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 GTF2A2P52657 109 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 RWDD2BP57060 319 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 DLG4P78352 724 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 ZKSCAN8Q15776 578 aaPredicted RBP10.2□□□□□ -0.78
TTC39C-203ENST00000540918 Q4G0T1 1027 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 KDELC2Q7Z4H8 507 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 LRRN4CLQ8ND94 238 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 SLC20A1Q8WUM9 679 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 RPGRIP1Q96KN7 1286 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 TMEM117Q9H0C3 514 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 CYP39A1Q9NYL5 469 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 HES2Q9Y543 173 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 GNGT1P63211 74 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 TUBB4BP68371 445 aa10.2□□□□□ -0.78
TTC39C-203ENST00000540918 IRX4P78413 519 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms