RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CAMTA2O94983 1202 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 RINT1Q6NUQ1 792 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 NT5DC3Q86UY8 548 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 TTC17Q96AE7 1141 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 PNMA5Q96PV4 448 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 UBN1Q9NPG3 1134 aa13.86□□□□□ -0.19
DNMT1-203ENST00000540357 PPARGC1AQ9UBK2 798 aaKnown RBP13.86□□□□□ -0.19
DNMT1-203ENST00000540357 GRIN2DO15399 1336 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 EPHB6O15197 1021 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 ITGA8P53708 1063 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 FUT2Q10981 343 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 TMEM119Q4V9L6 283 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 ZBED8Q8IZ13 594 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 TAB3Q8N5C8 712 aaPredicted RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 CDKL2Q92772 493 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 GOLGA8IPA6NC78 632 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 GOLGA8JA6NMD2 632 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 RIPK2O43353 540 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 BBOX1O75936 387 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 ACADSP16219 412 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 RASA3Q14644 834 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 ALKBH8Q96BT7 664 aaKnown RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 MIS12Q9H081 205 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 BLOC1S4Q9NUP1 217 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 PDIA2Q13087 525 aaKnown RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 ZYXQ15942 572 aaKnown RBP13.85□□□□□ -0.19
DNMT1-203ENST00000540357 C1orf146Q5VVC0 180 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 FAM161BQ96MY7 647 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 STAT2P52630 851 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 UBXN2AP68543 259 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 GPS1Q13098 491 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 XRCC4Q13426 336 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 C11orf63Q6NUN7 778 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 MAP7D3Q8IWC1 876 aa13.85□□□□□ -0.19
DNMT1-203ENST00000540357 H7C0C1 242 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 ATP5OP48047 213 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 SCFD2Q8WU76 684 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 FAM96AQ9H5X1 160 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 PSMC3IPQ9P2W1 217 aaPredicted RBP13.84□□□□□ -0.19
DNMT1-203ENST00000540357 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 LPXNO60711 386 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 KCNA3P22001 575 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 PSMC4P43686 418 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 TMPRSS15P98073 1019 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 KCNMA1Q12791 1236 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 CUL3Q13618 768 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 DAB2IPQ5VWQ8 1189 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 C4orf32Q8N8J7 132 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 CYTH2Q99418 400 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 ZNF263O14978 683 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 CYP26A1O43174 497 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 GSTA2P09210 222 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 NUDT17P0C025 328 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 PGM1P36871 562 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 TRIM72Q6ZMU5 477 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 KIRREL3Q8IZU9 778 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 MTRQ99707 1265 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 CD209Q9NNX6 404 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
DNMT1-203ENST00000540357 FAF1Q9UNN5 650 aaPredicted RBP13.84□□□□□ -0.19
DNMT1-203ENST00000540357 GARSP41250 739 aaKnown RBP13.83□□□□□ -0.19
DNMT1-203ENST00000540357 MIGA2Q7L4E1 593 aa13.83□□□□□ -0.19
DNMT1-203ENST00000540357 CDC42EP4Q9H3Q1 356 aaKnown RBP13.83□□□□□ -0.19
DNMT1-203ENST00000540357 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.19
DNMT1-203ENST00000540357 FLT1P17948 1338 aa13.83□□□□□ -0.19
DNMT1-203ENST00000540357 WNT7AO00755 349 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 AKR1B1P15121 316 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 PRKCIP41743 596 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 MAGEA4P43358 317 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 TMEM179Q6ZVK1 233 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 PDP2Q9P2J9 529 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 PHTF1Q9UMS5 762 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 KCNJ1P48048 391 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 PPP4CP60510 307 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 DYNLT1P63172 113 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 CATSPER3Q86XQ3 398 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 TEKT4Q8WW24 435 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 NUF2Q9BZD4 464 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 NPHS2Q9NP85 383 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 MTO1Q9Y2Z2 717 aaKnown RBP13.83□□□□□ -0.2
DNMT1-203ENST00000540357 MAD1L1Q9Y6D9 718 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 ZBED4O75132 1171 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 P3H1Q32P28 736 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 WDR75Q8IWA0 830 aaKnown RBP13.83□□□□□ -0.2
DNMT1-203ENST00000540357 C9orf72Q96LT7 481 aa13.83□□□□□ -0.2
DNMT1-203ENST00000540357 DCLRE1BQ9H816 532 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms