RNA–Protein interactions for RNA: ENST00000540280.1

TMEM109-203, Transcript of transmembrane protein 109, humanhuman

TSL 3

Gene TMEM109, Length 724 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM109-203ENST00000540280 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 GTF3C6Q969F1 213 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
TMEM109-203ENST00000540280 PDCD2LQ9BRP1 358 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 SLC26A6Q9BXS9 759 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 RHOBTB2Q9BYZ6 727 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 PIDD1Q9HB75 910 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 RIC8AQ9NPQ8 531 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 SH3GLB2Q9NR46 395 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 KCNK4Q9NYG8 393 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 SRPK3Q9UPE1 567 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 MTCL1Q9Y4B5 1905 aaKnown RBP12.28□□□□□ -0.44
TMEM109-203ENST00000540280 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 COL4A2P08572 1712 aa12.28□□□□□ -0.44
TMEM109-203ENST00000540280 LNP1A1A4G5 178 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 LILRB3O75022 631 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 STAM2O75886 525 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 MARK3P27448 753 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 ALDH7A1P49419 539 aaKnown RBP12.27□□□□□ -0.45
TMEM109-203ENST00000540280 KCNC4Q03721 635 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 PGM5Q15124 567 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 CYP26C1Q6V0L0 522 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 DDX53Q86TM3 631 aaKnown RBP12.27□□□□□ -0.45
TMEM109-203ENST00000540280 VSIG10LQ86VR7 867 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 FCHSD1Q86WN1 690 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 ABI1Q8IZP0 508 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 CCDC148Q8NFR7 591 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 TMEM40Q8WWA1 233 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 IER2Q9BTL4 223 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 ZMYND12Q9H0C1 365 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 ELAC1Q9H777 363 aaKnown RBP12.27□□□□□ -0.45
TMEM109-203ENST00000540280 LMAN1LQ9HAT1 526 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 C2orf42Q9NWW7 574 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 ATMQ13315 3056 aa12.27□□□□□ -0.45
TMEM109-203ENST00000540280 LARGE1O95461 756 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 FOSP01100 380 aaPredicted RBP12.26□□□□□ -0.45
TMEM109-203ENST00000540280 TGFB3P10600 412 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 GNA11P29992 359 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
TMEM109-203ENST00000540280 ADCY7P51828 1080 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
TMEM109-203ENST00000540280 EMILIN2Q9BXX0 1053 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 CDHR5Q9HBB8 845 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 C6orf50Q9HD87 102 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 GINS2Q9Y248 185 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 PCDHGA5Q9Y5G8 931 aa12.26□□□□□ -0.45
TMEM109-203ENST00000540280 NUP205Q92621 2012 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 SPATA31D3P0C874 917 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 FSHRP23945 695 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 CCND2P30279 289 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 MCM2P49736 904 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 SIM1P81133 766 aaPredicted RBP12.25□□□□□ -0.45
TMEM109-203ENST00000540280 KRT76Q01546 638 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 SPATA31D4Q6ZUB0 917 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 RNF169Q8NCN4 708 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 BICD2Q8TD16 824 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 HELQQ8TDG4 1101 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 WASF1Q92558 559 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 IGSF21Q96ID5 467 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 PHF20Q9BVI0 1012 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 PCDHA6Q9UN73 950 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 PCDHA8Q9Y5H6 950 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 KDM3AQ9Y4C1 1321 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
TMEM109-203ENST00000540280 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 HOXA2O43364 376 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 ZC3H11AO75152 810 aaKnown RBP eCLIP12.24□□□□□ -0.45
TMEM109-203ENST00000540280 UBE2SQ16763 222 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 PCNX4Q63HM2 1172 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 MTSS1LQ765P7 747 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 WDR5BQ86VZ2 330 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 NECAB1Q8N987 351 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 NSUN7Q8NE18 718 aaKnown RBP12.24□□□□□ -0.45
TMEM109-203ENST00000540280 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 GAB3Q8WWW8 586 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 LLPHQ9BRT6 129 aaKnown RBP12.24□□□□□ -0.45
TMEM109-203ENST00000540280 ADAMTS10Q9H324 1103 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 TMEM9BQ9NQ34 198 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 CDH7Q9ULB5 785 aa12.24□□□□□ -0.45
TMEM109-203ENST00000540280 ZFP37Q9Y6Q3 630 aaPredicted RBP12.24□□□□□ -0.45
TMEM109-203ENST00000540280 CDX4O14627 284 aaPredicted RBP12.23□□□□□ -0.45
TMEM109-203ENST00000540280 RPP40O75818 363 aaKnown RBP12.23□□□□□ -0.45
TMEM109-203ENST00000540280 XBP1P17861 261 aa12.23□□□□□ -0.45
TMEM109-203ENST00000540280 NTHL1P78549 312 aa12.23□□□□□ -0.45
TMEM109-203ENST00000540280 MRPS9P82933 396 aaKnown RBP12.23□□□□□ -0.45
TMEM109-203ENST00000540280 ST3GAL1Q11201 340 aa12.23□□□□□ -0.45
TMEM109-203ENST00000540280 DSC3Q14574 896 aa12.23□□□□□ -0.45
TMEM109-203ENST00000540280 GNPTABQ3T906 1256 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms