RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ITIH3Q06033 890 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 GLYCTKQ8IVS8 523 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 PRPF18Q99633 342 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 TSSK1BQ9BXA7 367 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 EIF2AQ9BY44 585 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 STK33Q9BYT3 514 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 SALL4Q9UJQ4 1053 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 NPATQ14207 1427 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 CCDC188H7C350 402 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 ESRRBO95718 433 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 SLC5A1P13866 664 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 ETFBP38117 255 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 VCPP55072 806 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 WASHC2DQ5SRD0 308 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 BTBD10Q9BSF8 475 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 TRIM39Q9HCM9 518 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 DTNAQ9Y4J8 743 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 PIK3R2O00459 728 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 MAP4P27816 1152 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 PMLP29590 882 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 CPVLQ9H3G5 476 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 USP40Q9NVE5 1235 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 IL1RAPL1Q9NZN1 696 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 POGZQ7Z3K3 1410 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 CYTH3O43739 400 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 TPBGLP0DKB5 382 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 AMPD1P23109 780 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 SARSP49591 514 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 PDIA2Q13087 525 aaKnown RBP11.76□□□□□ -0.53
PBX1-212ENST00000540236 PDK3Q15120 406 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 LDLRAP1Q5SW96 308 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 MEI1Q5TIA1 1274 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 IQCKQ8N0W5 287 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 OGFOD1Q8N543 542 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 QRICH2Q9H0J4 1663 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 A0A1W2PQC6 194 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ANPEPP15144 967 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 INAQ16352 499 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 TMEM132AQ24JP5 1023 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CASC4Q6P4E1 433 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 DNAJC14Q6Y2X3 702 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 POU5F2Q8N7G0 328 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CCDC89Q8N998 374 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 C12orf65Q9H3J6 166 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 OSGEPQ9NPF4 335 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 GID8Q9NWU2 228 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 XDHP47989 1333 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 FAM47DPA6NHR8 397 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CYP27B1O15528 508 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 MAN1A2O60476 641 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 FAM13AO94988 1023 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 BCRP11274 1271 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 RAG1P15918 1043 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 MAP3K7CLP57077 242 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ADAM17P78536 824 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 BTNL9Q6UXG8 535 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 RAPH1Q70E73 1250 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 CCSER1Q9C0I3 900 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 PABPC3Q9H361 631 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 ZC4H2Q9NQZ6 224 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CLDN3O15551 220 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 NR2F2P24468 414 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ECHDC2Q86YB7 292 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 DCLK2Q8N568 766 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 TRIM64CA6NLI5 447 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 H0YIN7 160 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 IPO5O00410 1097 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 RIPK2O43353 540 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 TJP3O95049 919 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 LONP1P36776 959 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CD302Q8IX05 232 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 EXOC8Q8IYI6 725 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ACAP3Q96P50 834 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 TMCO1Q9UM00 188 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 A0A087X0T9 212 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CALUO43852 315 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 FAM228BP0C875 321 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 SCG2P13521 617 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ITGA8P53708 1063 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 C21orf59P57076 290 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 EARS2Q5JPH6 523 aaKnown RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 CLVS1Q8IUQ0 354 aaPredicted RBP11.75□□□□□ -0.53
PBX1-212ENST00000540236 ADSSL1Q8N142 457 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 CCDC127Q96BQ5 260 aa11.75□□□□□ -0.53
PBX1-212ENST00000540236 ERP44Q9BS26 406 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms