RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HOXB13Q92826 284 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KAT5Q92993 513 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 HPS3Q969F9 1004 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KIAA1191Q96A73 305 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NMD3Q96D46 503 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM169Q96HH4 297 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 YTHDC1Q96MU7 727 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ZMAT3Q9HA38 289 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DTLQ9NZJ0 730 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 STAP2Q9UGK3 403 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DPP7Q9UHL4 492 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CDC23Q9UJX2 597 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 BTBD3Q9Y2F9 522 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TTLL3Q9Y4R7 772 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 A0A1W2PR48 441 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TCRBV5S2A0A599 114 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GXYLT2A0PJZ3 443 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 BUB1BO60566 1050 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 OFD1O75665 1012 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PAPLNO95428 1278 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 IL2RBP14784 551 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PRKCAP17252 672 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PFKLP17858 780 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 APEX1P27695 318 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PRIM2P49643 509 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ALDH5A1P51649 535 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 RTP1P59025 263 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NKX6-1P78426 367 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CDK17Q00537 523 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TRIM60Q495X7 471 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 VWA5B1Q5TIE3 1220 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MBNL2Q5VZF2 373 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 C11orf88Q6PI97 169 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KCTD1Q719H9 257 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GPRIN1Q7Z2K8 1008 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MSL3Q8N5Y2 521 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 C2orf69Q8N8R5 385 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CDYL2Q8N8U2 506 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DTX3Q8N9I9 347 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 OR1N1Q8NGS0 311 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SPPL3Q8TCT6 385 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 IPCEF1Q8WWN9 437 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 OVCA2Q8WZ82 227 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM41AQ96HV5 264 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ZSWIM3Q96MP5 696 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ADAM7Q9H2U9 754 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MYH16Q9H6N6 1097 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 C14orf93Q9H972 538 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GPR35Q9HC97 309 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PDP2Q9P2J9 529 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DSEQ9UL01 958 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PALD1Q9ULE6 856 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SLC5A6Q9Y289 635 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GPR45Q9Y5Y3 372 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KDM6BO15054 1643 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC189A1A4V9 331 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KLHL33A6NCF5 533 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 FOXP2O15409 715 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CYP27B1O15528 508 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NDUFS2O75306 463 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 LRG1P02750 347 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CENPBP07199 599 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ITGA5P08648 1049 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 HOXB5P09067 269 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SBK3P0C264 359 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GNAT1P11488 350 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 VEGFAP15692 232 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SP100P23497 879 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 IGFBP6P24592 240 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PIK3CBP42338 1070 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GRK6P43250 576 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CLNS1AP54105 237 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CLUL1Q15846 466 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PDCD2Q16342 344 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KLHDC7AQ5VTJ3 777 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KRT74Q7RTS7 529 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 MILR1Q7Z6M3 343 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DRC7Q8IY82 874 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SPICE1Q8N0Z3 855 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 AOPEPQ8N6M6 819 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PJA1Q8NG27 643 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 COA7Q96BR5 231 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ARSGQ96EG1 525 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TRMT2BQ96GJ1 504 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 B3GNT5Q9BYG0 378 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF703Q9H7S9 590 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PAK6Q9NQU5 681 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GNL3LQ9NVN8 582 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NME7Q9Y5B8 376 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ZC3H12DA2A288 527 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 FAM155AB1AL88 458 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KPNA5O15131 536 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TRIM24O15164 1050 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 HTRA2O43464 458 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PCDH8O95206 1070 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 KRT18P05783 430 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 HLA-DOAP06340 250 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 POU2F2P09086 479 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PCSK1P29120 753 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms