RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 GOLGA8JA6NMD2 632 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 OGTO15294 1046 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 SGPL1O95470 568 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 VAMP7P51809 220 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 MCL1Q07820 350 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 CETN1Q12798 172 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 NR1I3Q14994 352 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 SNX17Q15036 470 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 DCAF4L1Q3SXM0 396 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 SPECC1LQ69YQ0 1117 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 APTXQ7Z2E3 356 aaKnown RBP16.78■□□□□ 0.28
VAMP1-207ENST00000539047 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 VSTM4Q8IW00 320 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 IQCDQ96DY2 449 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 FAM213AQ9BRX8 229 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 MINDY3Q9H8M7 445 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.78■□□□□ 0.28
VAMP1-207ENST00000539047 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
VAMP1-207ENST00000539047 GRIN2DO15399 1336 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 ITIH6Q6UXX5 1313 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 A0A1W2PQC6 194 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 NRDCO43847 1150 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 TSPAN1O60635 241 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 CTSHP09668 335 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 MCF2P10911 925 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 ADSSP30520 456 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 GSDMDP57764 484 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 SURF1Q15526 300 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 FNBP1Q96RU3 617 aa16.77■□□□□ 0.28
VAMP1-207ENST00000539047 TRMT13Q9NUP7 481 aaKnown RBP16.77■□□□□ 0.28
VAMP1-207ENST00000539047 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
VAMP1-207ENST00000539047 B4GALT5O43286 388 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CYP24A1Q07973 514 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 KCNH2Q12809 1159 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 BFSP2Q13515 415 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 MIIPQ5JXC2 388 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 SLC27A1Q6PCB7 646 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CBWD2Q8IUF1 395 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CAGE1Q8TC20 777 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 TRIM6Q9C030 488 aaPredicted RBP16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 PDZD7Q9H5P4 517 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 AGPAT5Q9NUQ2 364 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 PIN4Q9Y237 131 aaKnown RBP16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CENPFP49454 3210 aa16.76■□□□□ 0.27
VAMP1-207ENST00000539047 CITO14578 2027 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 GPR182O15218 404 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 B4GALT4O60513 344 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 CSDE1O75534 798 aaKnown RBP16.75■□□□□ 0.27
VAMP1-207ENST00000539047 RPS6KA5O75582 802 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 ARF4P18085 180 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-207ENST00000539047 PROZP22891 400 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 MYL7Q01449 175 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 AMHR2Q16671 573 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 HACE1Q8IYU2 909 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 USP38Q8NB14 1042 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 CPB2Q96IY4 423 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 ZBTB45Q96K62 511 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-207ENST00000539047 ERGIC2Q96RQ1 377 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 SENP6Q9GZR1 1112 aaPredicted RBP16.75■□□□□ 0.27
VAMP1-207ENST00000539047 CDT1Q9H211 546 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 TANC1Q9C0D5 1861 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 PDE4DIPQ5VU43 2346 aa16.75■□□□□ 0.27
VAMP1-207ENST00000539047 TEX33O43247 280 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 IL18RAPO95256 599 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 EDN1P05305 212 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 ADRB2P07550 413 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 TRIM21P19474 475 aaKnown RBP16.74■□□□□ 0.27
VAMP1-207ENST00000539047 GJA8P48165 433 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 ACOT2P49753 483 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 PAK2Q13177 524 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 PSMD6Q15008 389 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 SYCP1Q15431 976 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 NEK11Q8NG66 645 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 CCDC127Q96BQ5 260 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 MFSD14AQ96MC6 490 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
VAMP1-207ENST00000539047 TRPV6Q9H1D0 765 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 RPF1Q9H9Y2 349 aaKnown RBP16.74■□□□□ 0.27
VAMP1-207ENST00000539047 USP20Q9Y2K6 914 aa16.74■□□□□ 0.27
VAMP1-207ENST00000539047 ANK1P16157 1881 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
VAMP1-207ENST00000539047 DCDC2CA8MYV0 355 aa16.73■□□□□ 0.27
VAMP1-207ENST00000539047 P4HA2O15460 535 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms