RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 XXYLT1Q8NBI6 393 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 TMEM40Q8WWA1 233 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 PRIMPOLQ96LW4 560 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 ACO2Q99798 780 aaKnown RBP15.43■□□□□ 0.06
CD4-208ENST00000538827 SEZ6LQ9BYH1 1024 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 VPS16Q9H269 839 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 LIMA1Q9UHB6 759 aaKnown RBP15.43■□□□□ 0.06
CD4-208ENST00000538827 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
CD4-208ENST00000538827 TOM1L1O75674 476 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 AKAP3O75969 853 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 TPM3P06753 285 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 ADSSP30520 456 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 ZNF75DP51815 510 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 UBASH3AP57075 661 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 MGAT3Q09327 533 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 MYBPC2Q14324 1141 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 NOLC1Q14978 699 aaKnown RBP eCLIP15.42■□□□□ 0.06
CD4-208ENST00000538827 AMHR2Q16671 573 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 FAM187BQ17R55 369 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 TRIM71Q2Q1W2 868 aaKnown RBP15.42■□□□□ 0.06
CD4-208ENST00000538827 TRIM60Q495X7 471 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 ZNF697Q5TEC3 545 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 TCERG1LQ5VWI1 586 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 MPZL3Q6UWV2 235 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 SLC9A9Q8IVB4 645 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 FAM126BQ8IXS8 530 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 GPD1LQ8N335 351 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 ZSWIM2Q8NEG5 633 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 FAM213AQ9BRX8 229 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 TUBGCP2Q9BSJ2 902 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 NOC4LQ9BVI4 516 aaKnown RBP15.42■□□□□ 0.06
CD4-208ENST00000538827 XPO4Q9C0E2 1151 aaKnown RBP15.42■□□□□ 0.06
CD4-208ENST00000538827 PDZD7Q9H5P4 517 aa15.42■□□□□ 0.06
CD4-208ENST00000538827 ARMCX3Q9UH62 379 aaPredicted RBP15.42■□□□□ 0.06
CD4-208ENST00000538827 AGO2Q9UKV8 859 aaKnown RBP15.42■□□□□ 0.06
CD4-208ENST00000538827 N4BP3O15049 544 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 CLDN3O15551 220 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 ADRB2P07550 413 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 GHRP10912 638 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 KRT13P13646 458 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 ARF4P18085 180 aaPredicted RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 EIF4BP23588 611 aaKnown RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 NCBP1Q09161 790 aaKnown RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 MAN2A1Q16706 1144 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 SLC39A5Q6ZMH5 540 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 FAM228AQ86W67 206 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 MAFAQ8NHW3 353 aaPredicted RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 MKNK1Q9BUB5 465 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 HAPLN2Q9GZV7 340 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 CDT1Q9H211 546 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 MMRN2Q9H8L6 949 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 DMAC2Q9NW81 257 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 PIN4Q9Y237 131 aaKnown RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 ATP11BQ9Y2G3 1177 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 NOC2LQ9Y3T9 749 aaKnown RBP15.41■□□□□ 0.06
CD4-208ENST00000538827 RALGAPA2Q2PPJ7 1873 aa15.41■□□□□ 0.06
CD4-208ENST00000538827 RBAK-RBAKDNI3L0D1 243 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 KIAA0391O15091 583 aaKnown RBP15.4■□□□□ 0.06
CD4-208ENST00000538827 EXTL3O43909 919 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 CAND2O75155 1236 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 RPS6KA5O75582 802 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 NPTXRO95502 500 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 CHRNA1P02708 482 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 CKBP12277 381 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 PLA2G5P39877 138 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 CDK7P50613 346 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 BFSP2Q13515 415 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 SNRNP35Q16560 246 aaKnown RBP15.4■□□□□ 0.06
CD4-208ENST00000538827 SEZ6Q53EL9 994 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 ZNF618Q5T7W0 954 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 FRMD5Q7Z6J6 570 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 RPAINQ86UA6 219 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 CBWD2Q8IUF1 395 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 DRC7Q8IY82 874 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 METTL14Q9HCE5 456 aaKnown RBP15.4■□□□□ 0.06
CD4-208ENST00000538827 AGPAT5Q9NUQ2 364 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.4■□□□□ 0.06
CD4-208ENST00000538827 ANK1P16157 1881 aa15.4■□□□□ 0.06
CD4-208ENST00000538827 PRUNE2Q8WUY3 3088 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 A0A0B4J269 797 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 A0A1B0GTH6 734 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 LGALS16A8MUM7 142 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 OGTO15294 1046 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 COL6A1P12109 1028 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 ACOT2P49753 483 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 OSTNP61366 133 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 MCL1Q07820 350 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 NFX1Q12986 1120 aaKnown RBP15.39■□□□□ 0.05
CD4-208ENST00000538827 PAK2Q13177 524 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 HSP90AA2PQ14568 343 aaPredicted RBP15.39■□□□□ 0.05
CD4-208ENST00000538827 PTPN21Q16825 1174 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 ZBTB41Q5SVQ8 909 aa15.39■□□□□ 0.05
CD4-208ENST00000538827 FKBP15Q5T1M5 1219 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms