RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PGBD4Q96DM1 585 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 ACCSQ96QU6 501 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 ADPGKQ9BRR6 497 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 CDT1Q9H211 546 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 NKX2-4Q9H2Z4 354 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 ANKFY1Q9P2R3 1169 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
CHD4-203ENST00000535717 TBKBP1A7MCY6 615 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 TISP43B9A030 160 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 RHOBTB3O94955 611 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 MCF2P10911 925 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 ITGA4P13612 1032 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 AKAP5P24588 427 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 MCL1Q07820 350 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 PSMD2Q13200 908 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 KCNB1Q14721 858 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 ZNF568Q3ZCX4 644 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.29
CHD4-203ENST00000535717 STXBP4Q6ZWJ1 553 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 KIAA0895Q8NCT3 520 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 SPATA20Q8TB22 786 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 ZNF507Q8TCN5 953 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 HELQQ8TDG4 1101 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 SCFD1Q8WVM8 642 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 TIFAQ96CG3 184 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 APOL6Q9BWW8 343 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 TMEM117Q9H0C3 514 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
CHD4-203ENST00000535717 PCDHA5Q9Y5H7 936 aa13.21□□□□□ -0.29
CHD4-203ENST00000535717 TRANK1O15050 2925 aa13.21□□□□□ -0.3
CHD4-203ENST00000535717 LINC01553A4QN01 128 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD4-203ENST00000535717 CLDN3O15551 220 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 HOXA2O43364 376 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 OFD1O75665 1012 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 SMC2O95347 1197 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 HARSP12081 509 aaKnown RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 TAP1Q03518 808 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 NOLC1Q14978 699 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD4-203ENST00000535717 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 CMTR2Q8IYT2 770 aaKnown RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 CEP120Q8N960 986 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 GPT2Q8TD30 523 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 CCDC47Q96A33 483 aaKnown RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 TMEM206Q9H813 350 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 SNTG2Q9NY99 539 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 STYXL1Q9Y6J8 313 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 FNDC1Q4ZHG4 1894 aaPredicted RBP13.2□□□□□ -0.3
CHD4-203ENST00000535717 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
CHD4-203ENST00000535717 A0A0B4J269 797 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 ARL5CA6NH57 179 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 ADSSP30520 456 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GRM5P41594 1212 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD4-203ENST00000535717 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD4-203ENST00000535717 CAMK4Q16566 473 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 BMT2Q1RMZ1 405 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 SEZ6Q53EL9 994 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 NOMO2Q5JPE7 1267 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GLB1LQ6UWU2 654 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 LRRC55Q6ZSA7 311 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 SPRED2Q7Z698 418 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 HACE1Q8IYU2 909 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 ABI1Q8IZP0 508 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 SMARCE1Q969G3 411 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 ZFP42Q96MM3 310 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GSDMAQ96QA5 445 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GAD1Q99259 594 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 UBN1Q9NPG3 1134 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 KLK14Q9P0G3 267 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 HCSTQ9UBK5 93 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 PARP2Q9UGN5 583 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 INPP5FQ9Y2H2 1132 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 GIT1Q9Y2X7 761 aa13.19□□□□□ -0.3
CHD4-203ENST00000535717 MRPL42Q9Y6G3 142 aaKnown RBP13.19□□□□□ -0.3
CHD4-203ENST00000535717 UBE4BO95155 1302 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 INPPL1O15357 1258 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 TGFB1I1O43294 461 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 FAM189A1O60320 539 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 RECQL4O94761 1208 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 LINC00271P0C7V0 271 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 MCM4P33991 863 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 MLH1P40692 756 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 OSTNP61366 133 aa13.18□□□□□ -0.3
CHD4-203ENST00000535717 ZBTB41Q5SVQ8 909 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms