RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 AJUBAQ96IF1 538 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 SMAD5Q99717 465 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 AMNQ9BXJ7 453 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 ACE2Q9BYF1 805 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 C14orf93Q9H972 538 aaKnown RBP4.22□□□□□ -1.73
SNHG1-202ENST00000535689 KCNK12Q9HB15 430 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CD320Q9NPF0 282 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 PRSS50Q9UI38 385 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 USP18Q9UMW8 372 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 MYOM2P54296 1465 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 ADGRB2O60241 1585 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CROCC2H7BZ55 1655 aa4.22□□□□□ -1.73
SNHG1-202ENST00000535689 CCDC144AA2RUR9 1427 aa4.21□□□□□ -1.73
SNHG1-202ENST00000535689 ABCC5O15440 1437 aa4.21□□□□□ -1.73
SNHG1-202ENST00000535689 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PRSS38A1L453 326 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 MROH6A6NGR9 719 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 NPIPB6E9PJ23 425 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 MARCH6O60337 910 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 RFPL1O75677 317 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 ENDOD1O94919 500 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PCDH8O95206 1070 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 MPIG6BO95866 241 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PFKMP08237 780 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 C1QTNF9P0C862 333 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 MC4RP32245 332 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 RGS3P49796 1198 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 WNT3AP56704 352 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CD83Q01151 205 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PPARAQ07869 468 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 SMAD4Q13485 552 aaKnown RBP4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PIN1Q13526 163 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-202ENST00000535689 GTF2H3Q13889 308 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 NOLC1Q14978 699 aaKnown RBP eCLIP4.21□□□□□ -1.741e-323■■■■■ 35.2
SNHG1-202ENST00000535689 GPR162Q16538 588 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 KANK2Q63ZY3 851 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CXorf57Q6NSI4 855 aaKnown RBP4.21□□□□□ -1.74
SNHG1-202ENST00000535689 Q6ZUG5 572 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 RALYLQ86SE5 291 aaKnown RBP4.21□□□□□ -1.74
SNHG1-202ENST00000535689 TMEFF1Q8IYR6 380 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CHPFQ8IZ52 775 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 UNC5BQ8IZJ1 945 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 LGI4Q8N135 537 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 OR5AN1Q8NGI8 311 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 COG1Q8WTW3 980 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CYFIP2Q96F07 1278 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 KATNBL1Q9H079 304 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 IFT122Q9HBG6 1241 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 MAN1C1Q9NR34 630 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 USP40Q9NVE5 1235 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 RCAN3Q9UKA8 241 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 THRAP3Q9Y2W1 955 aaKnown RBP4.21□□□□□ -1.74
SNHG1-202ENST00000535689 PPP2R3BQ9Y5P8 575 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CDY2AQ9Y6F7 541 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 DAPK1P53355 1430 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 ANKRD50Q9ULJ7 1429 aa4.21□□□□□ -1.74
SNHG1-202ENST00000535689 CEP350Q5VT06 3117 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ADGRL2O95490 1459 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 SBNO1A3KN83 1393 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 METP08581 1390 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 PMS2P1A4D2B8 440 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 DBX1A6NMT0 343 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 DDX3XO00571 662 aaKnown RBP eCLIP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 IL33O95760 270 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 GASTP01350 101 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 JUNP05412 331 aaKnown RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 HSPA6P17066 643 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 GPR3P46089 330 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ADKP55263 362 aaKnown RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 LGALS4P56470 323 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 TOP3AQ13472 1001 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 MYBPC3Q14896 1274 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ZNF124Q15973 351 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 INAVAQ3KP66 663 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 GAGE13Q4V321 117 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 CT83Q5H943 113 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 PRR31Q5SQ13 230 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 KRT40Q6A162 431 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 BTNL9Q6UXG8 535 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 USP30Q70CQ3 517 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 MIGA2Q7L4E1 593 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 SIAH1Q8IUQ4 282 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 DACT3Q96B18 629 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 EAF2Q96CJ1 260 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 SLC7A6OSQ96CW6 309 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ZSWIM3Q96MP5 696 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 YTHDC1Q96MU7 727 aaKnown RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 SYT17Q9BSW7 474 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 OR10A2Q9H208 303 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 KCTD10Q9H3F6 313 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 GREM2Q9H772 168 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 MANSC1Q9H8J5 431 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 CCM2LQ9NUG4 571 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ZNF180Q9UJW8 692 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ADAM29Q9UKF5 820 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 FAM184BQ9ULE4 1060 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 CLCA2Q9UQC9 943 aa4.2□□□□□ -1.74
SNHG1-202ENST00000535689 LUC7L2Q9Y383 392 aaKnown RBP4.2□□□□□ -1.74
SNHG1-202ENST00000535689 ZDHHC9Q9Y397 364 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms