RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TRAF1Q13077 416 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CASP8Q14790 479 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DHCR24Q15392 516 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DDB1Q16531 1140 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SKIDA1Q1XH10 827 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 C9orf84Q5VXU9 1444 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CEP85Q6P2H3 762 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FKBP9P1Q75LS8 142 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 IQCA1Q86XH1 822 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 TMEM139Q8IV31 216 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CCDC83Q8IWF9 413 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 AMOTL1Q8IY63 956 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 AOPEPQ8N6M6 819 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 KIAA1958Q8N8K9 716 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 NECAB1Q8N987 351 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 C3orf20Q8ND61 904 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FAM71BQ8TC56 605 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ARHGEF40Q8TER5 1519 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MZB1Q8WU39 189 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CHTF18Q8WVB6 975 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ATRIPQ8WXE1 791 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MADDQ8WXG6 1647 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ARHGAP45Q92619 1136 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 KIAA0232Q92628 1395 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DPF2Q92785 391 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 E2F7Q96AV8 911 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DHX58Q96C10 678 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CABS1Q96KC9 395 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PPP1R16BQ96T49 567 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MPHOSPH8Q99549 860 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 TACO1Q9BSH4 297 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SGPP1Q9BX95 441 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 NSD3Q9BZ95 1437 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 RNF38Q9H0F5 515 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 HSD3B7Q9H2F3 369 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 RABEP2Q9H5N1 569 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 KAT14Q9H8E8 782 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 FAM204AQ9H8W3 233 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 KCNK12Q9HB15 430 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SMURF1Q9HCE7 757 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PCDH18Q9HCL0 1135 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PCDH12Q9NPG4 1184 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ACSS2Q9NR19 701 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 KCNH7Q9NS40 1196 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 PDS5BQ9NTI5 1447 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DDX19AQ9NUU7 478 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MIS18AQ9NYP9 233 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 EIF2AK4Q9P2K8 1649 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 DDX20Q9UHI6 824 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ODF2LQ9ULJ1 636 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SMC3Q9UQE7 1217 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 APOBEC2Q9Y235 224 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 TRAPPC8Q9Y2L5 1435 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 ATP8A1Q9Y2Q0 1164 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 NOC2LQ9Y3T9 749 aaKnown RBP3.57□□□□□ -1.84
CSDE1-216ENST00000534389 SNX14Q9Y5W7 946 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
CSDE1-216ENST00000534389 MYO5CQ9NQX4 1742 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ABCC3O15438 1527 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 NPHP4O75161 1426 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 FAM135BQ49AJ0 1406 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CARMIL2Q6F5E8 1435 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TDRD9Q8NDG6 1382 aaKnown RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TEX51A0A1B0GUA7 166 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 AGPSO00116 658 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 HRKO00198 91 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 FOXP2O15409 715 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 MAFGO15525 162 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ZEB2O60315 1214 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 PEX10O60683 326 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CUTAO60888 179 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ULK1O75385 1050 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CYP7B1O75881 506 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ZNF202O95125 648 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 IPO7O95373 1038 aaKnown RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TUBB4AP04350 444 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 AMY2AP04746 511 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CYP17A1P05093 508 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 PYGLP06737 847 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ASGR2P07307 311 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ENO2P09104 434 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 SLC9A1P19634 815 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 AMY2BP19961 511 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 POU3F2P20265 443 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 AARSP49588 968 aaKnown RBP eCLIP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CLNS1AP54105 237 aaKnown RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 VSNL1P62760 191 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 YBX1P67809 324 aaKnown RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 CACNB2Q08289 660 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 RESTQ13127 1097 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ME3Q16798 604 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 PTPN21Q16825 1174 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 ACCSLQ4AC99 568 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 PRAMEF18Q5VWM3 479 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 AP1ARQ63HQ0 302 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TIGD7Q6NT04 549 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-216ENST00000534389 HHIPL2Q6UWX4 724 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TMC5Q6UXY8 1006 aa3.56□□□□□ -1.84
CSDE1-216ENST00000534389 TTLL7Q6ZT98 887 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms