RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 UBXN11Q5T124 520 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 FUT10Q6P4F1 479 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 NOTUMQ6P988 496 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 GLYCTKQ8IVS8 523 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 GAD1Q99259 594 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 NELL2Q99435 816 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.54
COPB1-207ENST00000529866 FAM217BQ9NTX9 383 aaPredicted RBP11.65□□□□□ -0.54
COPB1-207ENST00000529866 MRPS17Q9Y2R5 130 aaKnown RBP11.65□□□□□ -0.54
COPB1-207ENST00000529866 SF3B1O75533 1304 aaKnown RBP eCLIP11.64□□□□□ -0.558e-14■■■■■ 28.8
COPB1-207ENST00000529866 CFAP47Q6ZTR5 3102 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 LILRB5O75023 590 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 EFEMP2O95967 443 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 SRGAP2CP0DJJ0 459 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 AXLP30530 894 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 HOXA9P31269 272 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 RFC5P40937 340 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 SCNN1GP51170 649 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 KRT32Q14532 448 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 PPP2R5DQ14738 602 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 Q4G0T1 1027 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 PPM1LQ5SGD2 360 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 PLA2G4FQ68DD2 849 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 LILRA6Q6PI73 481 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 GRASPQ7Z6J2 395 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 ST13P5Q8NFI4 369 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 NETO1Q8TDF5 533 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 FGF13Q92913 245 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 RPP25Q9BUL9 199 aaKnown RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 TRIM6Q9C030 488 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 FBXW11Q9UKB1 542 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 GIT1Q9Y2X7 761 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 IPPQ9Y573 584 aa11.64□□□□□ -0.55
COPB1-207ENST00000529866 MYH9P35579 1960 aaKnown RBP11.64□□□□□ -0.55
COPB1-207ENST00000529866 ASAP2O43150 1006 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 STBD1O95210 358 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 HMGB1P09429 215 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 RPS9P46781 194 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 NRLP54845 237 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 EXOSC10Q01780 885 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 LAMTOR4Q0VGL1 99 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 ZNF852Q6ZMS4 543 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 TPRG1Q6ZUI0 275 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 ANO5Q75V66 913 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 RNF149Q8NC42 400 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 SMG8Q8ND04 991 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 TCP11Q8WWU5 503 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 PRPF31Q8WWY3 499 aaKnown RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 NELL1Q92832 810 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 GJA10Q969M2 543 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 CLDN23Q96B33 292 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 CHAMP1Q96JM3 812 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 B3GALT6Q96L58 329 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 ZFP42Q96MM3 310 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 GPR62Q9BZJ7 368 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 MINDY3Q9H8M7 445 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 POLIQ9UNA4 740 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 MTF2Q9Y483 593 aaPredicted RBP11.63□□□□□ -0.55
COPB1-207ENST00000529866 C2orf16Q68DN1 1984 aa11.63□□□□□ -0.55
COPB1-207ENST00000529866 FAM208BQ5VWN6 2430 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 CEP295Q9C0D2 2601 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 F8W810 466 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 ADAMTS3O15072 1205 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 TADA2AO75478 443 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 C8AP07357 584 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 POU2F2P09086 479 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 CPA1P15085 419 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
COPB1-207ENST00000529866 TARSP26639 723 aaKnown RBP11.62□□□□□ -0.55
COPB1-207ENST00000529866 QARSP47897 775 aaKnown RBP11.62□□□□□ -0.55
COPB1-207ENST00000529866 GRIK3Q13003 919 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 B3GNT9Q6UX72 402 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 TBCKQ8TEA7 893 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 TMEM143Q96AN5 459 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 IER2Q9BTL4 223 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 APOL6Q9BWW8 343 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
COPB1-207ENST00000529866 CSRNP2Q9H175 543 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 DHX33Q9H6R0 707 aaKnown RBP11.62□□□□□ -0.55
COPB1-207ENST00000529866 KCNH3Q9ULD8 1083 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 DOCK8Q8NF50 2099 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 ZMYM2Q9UBW7 1377 aa11.62□□□□□ -0.55
COPB1-207ENST00000529866 FANCMQ8IYD8 2048 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 SLC30A4O14863 429 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 TSPAN1O60635 241 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 LRP3O75074 770 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 CD72P21854 359 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 NPEPPSP55786 919 aa11.61□□□□□ -0.55
COPB1-207ENST00000529866 NLRP5P59047 1200 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms