RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MYBL2P10244 700 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 IARSP41252 1262 aaKnown RBP6.05□□□□□ -1.44
C11orf88-204ENST00000529661 GPR3P46089 330 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 MAN2A2P49641 1150 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 SCNN1GP51170 649 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 DGCR2P98153 550 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 FOXE3Q13461 319 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 PCBP2Q15366 365 aaKnown RBP eCLIP6.05□□□□□ -1.44
C11orf88-204ENST00000529661 CRIP3Q6Q6R5 217 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 C1orf162Q8NEQ5 155 aaPredicted RBP6.05□□□□□ -1.44
C11orf88-204ENST00000529661 ATXN2LQ8WWM7 1075 aaKnown RBP6.05□□□□□ -1.44
C11orf88-204ENST00000529661 RAX2Q96IS3 184 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 ORAI2Q96SN7 254 aa6.05□□□□□ -1.44
C11orf88-204ENST00000529661 WASHC2AQ641Q2 1341 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 KIF3BO15066 747 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 HOXA3O43365 443 aaPredicted RBP6.04□□□□□ -1.44
C11orf88-204ENST00000529661 TMEM127O75204 238 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 SCGB1D2O95969 90 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 FSHBP01225 129 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 ZSCAN20P17040 1043 aaPredicted RBP6.04□□□□□ -1.44
C11orf88-204ENST00000529661 PTH1RQ03431 593 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 ABCB5Q2M3G0 1257 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 PGM2L1Q6PCE3 622 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 ABHD15Q6UXT9 468 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 IL17RAQ96F46 866 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 RHOBTB2Q9BYZ6 727 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 AURKAIP1Q9NWT8 199 aaPredicted RBP6.04□□□□□ -1.44
C11orf88-204ENST00000529661 ZNF180Q9UJW8 692 aa6.04□□□□□ -1.44
C11orf88-204ENST00000529661 NPIPB8E9PQR5 432 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA12O60330 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 GYPEP15421 78 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 HK1P19367 917 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 CCND1P24385 295 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 GZMKP49863 264 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 WNT3AP56704 352 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 MEF2AQ02078 507 aaPredicted RBP6.03□□□□□ -1.44
C11orf88-204ENST00000529661 TOR2AQ5JU69 321 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 NXNQ6DKJ4 435 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 TMPRSS6Q8IU80 811 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 TCEAL8Q8IYN2 117 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 MYO1HQ8N1T3 1032 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 Q8N1X5 172 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 CPA6Q8N4T0 437 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 GLB1L3Q8NCI6 653 aaPredicted RBP6.03□□□□□ -1.44
C11orf88-204ENST00000529661 MDGA1Q8NFP4 955 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 AUTS2Q8WXX7 1259 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 ST8SIA2Q92186 375 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 ZNF503Q96F45 646 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 CPPED1Q9BRF8 314 aaPredicted RBP6.03□□□□□ -1.44
C11orf88-204ENST00000529661 ENKD1Q9H0I2 346 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA9Q9Y5G4 932 aaKnown RBP6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA8Q9Y5G5 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA7Q9Y5G6 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA6Q9Y5G7 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA3Q9Y5H0 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 PCDHGA2Q9Y5H1 932 aa6.03□□□□□ -1.44
C11orf88-204ENST00000529661 FZD7O75084 574 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 SNUPNO95149 360 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 MT-CO1P00395 513 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 CTSSP25774 331 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 RECQLP46063 649 aaPredicted RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 MRPS9P82933 396 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 SRSF2Q01130 221 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 ODF1Q14990 250 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 LSM12Q3MHD2 195 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 MIIPQ5JXC2 388 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 FAM102BQ5T8I3 360 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 APBB1IPQ7Z5R6 666 aaPredicted RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 WDR75Q8IWA0 830 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 TSPEARQ8WU66 669 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 SNX33Q8WV41 574 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 JPH3Q8WXH2 748 aaPredicted RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 CDC5LQ99459 802 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 SLC52A1Q9NWF4 448 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 PARPBPQ9NWS1 579 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 DNAJC28Q9NX36 388 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 IP6K2Q9UHH9 426 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 HDAC5Q9UQL6 1122 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 ANKRD6Q9Y2G4 727 aa6.02□□□□□ -1.45
C11orf88-204ENST00000529661 LUC7L2Q9Y383 392 aaKnown RBP6.02□□□□□ -1.45
C11orf88-204ENST00000529661 KLHL33A6NCF5 533 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 GOLGA6L6A8MZA4 724 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 ITGA10O75578 1167 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 MTHFD2P13995 350 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 ADSLP30566 484 aaPredicted RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 GDF5P43026 501 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 RABGGTBP53611 331 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 MRPL49Q13405 166 aaKnown RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 MUM1Q2TAK8 710 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 TMEM240Q5SV17 173 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 USP51Q70EK9 711 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 C14orf80Q86SX3 495 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 SLC16A11Q8NCK7 471 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 TTC8Q8TAM2 541 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 CACTINQ8WUQ7 758 aaKnown RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 ZNF480Q8WV37 535 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 PAWRQ96IZ0 340 aaKnown RBP6.01□□□□□ -1.45
C11orf88-204ENST00000529661 MNTQ99583 582 aa6.01□□□□□ -1.45
C11orf88-204ENST00000529661 ACE2Q9BYF1 805 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms