RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, human

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD7-205	ENST00000527825	KCNC3	Q14003	757 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	UBXN2B	Q14CS0	331 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	TNNI3K	Q59H18	835 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	PRRT3	Q5FWE3	981 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	C12orf60	Q5U649	245 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	PSAPL1	Q6NUJ1	521 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	SLC30A10	Q6XR72	485 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	PDZD3	Q86UT5	571 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	CABP7	Q86V35	215 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	FTSJ3	Q8IY81	847 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	CMTR1	Q8N1G2	835 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	CELF5	Q8N6W0	485 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	C12orf76	Q8N812	135 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	COLGALT1	Q8NBJ5	622 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ZBTB44	Q8NCP5	570 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	PPTC7	Q8NI37	304 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	MRPS27	Q92552	414 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	FTHL17	Q9BXU8	183 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	FAM126A	Q9BYI3	521 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	FOXQ1	Q9C009	403 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ARMT1	Q9H993	441 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ZNF287	Q9HBT7	754 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	SYNPO2	Q9UMS6	1093 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	MTMR7	Q9Y216	660 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	LZTS1	Q9Y250	596 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ZDHHC9	Q9Y397	364 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	MRVI1	Q9Y6F6	885 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	FPGT-TNNI3K	V9GXZ4	949 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	ZNF532	Q9HCE3	1301 aa		4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.64	□□□□□ -1.67
CHD7-205	ENST00000527825	PDCD11	Q14690	1871 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	KANSL1L	A0AUZ9	987 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825		M0QZ92	97 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	NFIB	O00712	420 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SORBS3	O60504	671 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	LILRB5	O75023	590 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	XYLB	O75191	536 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	LRRN2	O75325	713 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PPFIA4	O75335	1185 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SASH3	O75995	380 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	MBD4	O95243	580 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SMIM10L2A	P0DMW4	78 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SMIM10L2B	P0DMW5	78 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SCG2	P13521	617 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	NID1	P14543	1247 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PDE6A	P16499	860 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	NFKB1	P19838	968 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SPINK2	P20155	84 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	MCC	P23508	829 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	TARS	P26639	723 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PPM1A	P35813	382 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	GATA4	P43694	442 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	NOVA1	P51513	510 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	ARHGAP4	P98171	946 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	ZNF252P-AS1	Q0IIN9	211 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CUL4A	Q13619	759 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	STXBP2	Q15833	593 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CCDC96	Q2M329	555 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	MCTP1	Q6DN14	999 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CCDC62	Q6P9F0	684 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	C19orf48	Q6RUI8	117 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	TSSK4	Q6SA08	328 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	TMC5	Q6UXY8	1006 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	TSHZ1	Q6ZSZ6	1077 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	KCTD1	Q719H9	257 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	KRT25	Q7Z3Z0	450 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825		Q8N3U1	123 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PDCL2	Q8N4E4	241 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SLC44A3	Q8N4M1	653 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	GLIS3	Q8NEA6	775 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	HELQ	Q8TDG4	1101 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	RSAD2	Q8WXG1	361 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	ARHGAP45	Q92619	1136 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	STAM	Q92783	540 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	GLG1	Q92896	1179 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	NXPE3	Q969Y0	559 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SYAP1	Q96A49	352 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CEP95	Q96GE4	821 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SPATA33	Q96N06	139 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	USP26	Q9BXU7	913 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	OSBPL7	Q9BZF2	842 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CHMP4B	Q9H444	224 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	TSPY26P	Q9H489	355 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	DIAPH3	Q9NSV4	1193 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	FAM53C	Q9NYF3	392 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	OGFR	Q9NZT2	677 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PNMA2	Q9UL42	364 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	PCDHB7	Q9Y5E2	793 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	KCNMB2	Q9Y691	235 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	SLC4A4	Q9Y6R1	1079 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	ASH1L	Q9NR48	2969 aa	Known RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	CCDC171	Q6TFL3	1326 aa		4.63	□□□□□ -1.67
CHD7-205	ENST00000527825	DOCK8	Q8NF50	2099 aa		4.63	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms