RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 RALGAPA2Q2PPJ7 1873 aa18.24■□□□□ 0.51
SMCO4-204ENST00000527149 TRIP11Q15643 1979 aa18.24■□□□□ 0.51
SMCO4-204ENST00000527149 LINC00271P0C7V0 271 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 STAG3L1P0CL83 205 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 FGFR1P11362 822 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
SMCO4-204ENST00000527149 PSMD2Q13200 908 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 NOLC1Q14978 699 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMCO4-204ENST00000527149 TMEM132AQ24JP5 1023 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 HABP4Q5JVS0 413 aaKnown RBP18.23■□□□□ 0.51
SMCO4-204ENST00000527149 GSDMAQ96QA5 445 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 ACCSQ96QU6 501 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 RAD9AQ99638 391 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 GDAQ9Y2T3 454 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 PCDHB7Q9Y5E2 793 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 PCDHA11Q9Y5I1 949 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
SMCO4-204ENST00000527149 A0A0B4J269 797 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 INPPL1O15357 1258 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 MEFVO15553 781 aaPredicted RBP18.22■□□□□ 0.51
SMCO4-204ENST00000527149 TLL1O43897 1013 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 MCF2P10911 925 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 ADSSP30520 456 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 LIG4P49917 911 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 RNF169Q8NCN4 708 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 SMARCE1Q969G3 411 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 BICD1Q96G01 975 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 CASD1Q96PB1 797 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 ADPGKQ9BRR6 497 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
SMCO4-204ENST00000527149 LRFN2Q9ULH4 789 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 PDCD11Q14690 1871 aaKnown RBP18.22■□□□□ 0.51
SMCO4-204ENST00000527149 NLRC5Q86WI3 1866 aa18.22■□□□□ 0.51
SMCO4-204ENST00000527149 ANK1P16157 1881 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 TGFB1I1O43294 461 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 DNAJB2P25686 324 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 AFF1P51825 1210 aaKnown RBP18.21■□□□□ 0.51
SMCO4-204ENST00000527149 RAB30Q15771 203 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 STXBP4Q6ZWJ1 553 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 TMEM192Q8IY95 271 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 YME1L1Q96TA2 773 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 TRIM6Q9C030 488 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-204ENST00000527149 TMEM117Q9H0C3 514 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-204ENST00000527149 MAN1B1Q9UKM7 699 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 INSL6Q9Y581 213 aa18.21■□□□□ 0.51
SMCO4-204ENST00000527149 CLDN3O15551 220 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 HOXA2O43364 376 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 RECQL4O94761 1208 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 SMC2O95347 1197 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 CA3P07451 260 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 BMP6P22004 513 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 GRM5P41594 1212 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 CAMK4Q16566 473 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 ZBTB41Q5SVQ8 909 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 SPRED2Q7Z698 418 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 SMYD4Q8IYR2 804 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-204ENST00000527149 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
SMCO4-204ENST00000527149 GSTCDQ8NEC7 633 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 HELQQ8TDG4 1101 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
SMCO4-204ENST00000527149 PGBD4Q96DM1 585 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 LRCH3Q96II8 777 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 ZBED2Q9BTP6 218 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 CXCL16Q9H2A7 254 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 KCTD10Q9H3F6 313 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 TMEM206Q9H813 350 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 RMND1Q9NWS8 449 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 SNTG2Q9NY99 539 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 HCSTQ9UBK5 93 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
SMCO4-204ENST00000527149 TDRD15B5MCY1 1934 aaKnown RBP18.19■□□□□ 0.5
SMCO4-204ENST00000527149 B4GALT3O60512 393 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 OFD1O75665 1012 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 MBD3O95983 291 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 HARSP12081 509 aaKnown RBP18.19■□□□□ 0.5
SMCO4-204ENST00000527149 ITGA4P13612 1032 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 AKAP5P24588 427 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 MLH1P40692 756 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 TAP1Q03518 808 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 COBLL1Q53SF7 1204 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 NELFCDQ8IXH7 590 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 CBWD1Q9BRT8 395 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 APOL6Q9BWW8 343 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 NUP62CLQ9H1M0 184 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 NKX2-4Q9H2Z4 354 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 GIT1Q9Y2X7 761 aa18.19■□□□□ 0.5
SMCO4-204ENST00000527149 LINC01553A4QN01 128 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 OGTO15294 1046 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 MORC3Q14149 939 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 KNOP1Q1ED39 458 aaKnown RBP18.18■□□□□ 0.5
SMCO4-204ENST00000527149 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
SMCO4-204ENST00000527149 SEZ6Q53EL9 994 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 ZNF658Q5TYW1 1059 aaPredicted RBP18.18■□□□□ 0.5
SMCO4-204ENST00000527149 GLB1LQ6UWU2 654 aa18.18■□□□□ 0.5
SMCO4-204ENST00000527149 LRRC55Q6ZSA7 311 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms