RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 KIF20AO95235 890 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 NPTXRO95502 500 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 EDN1P05305 212 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 RB1P06400 928 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 CA3P07451 260 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 CASP1P29466 404 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 GRM5P41594 1212 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 KMT5BQ4FZB7 885 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 CLLU1OSQ5K130 101 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 AGMOQ6ZNB7 445 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 CASD1Q96PB1 797 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 ZNF576Q9H609 170 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 RMND1Q9NWS8 449 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
CCS-202ENST00000525435 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
CCS-202ENST00000525435 LAMA2P24043 3122 aaKnown RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 LINC01553A4QN01 128 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 KIAA0391O15091 583 aaKnown RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 FGFR1P11362 822 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 MYOGP15173 224 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 ERVK-21P61565 698 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 TAP1Q03518 808 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 HSP90AA2PQ14568 343 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 NOLC1Q14978 699 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCS-202ENST00000525435 ZNF568Q3ZCX4 644 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 CDR2LQ86X02 465 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 URGCPQ8TCY9 931 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 TGS1Q96RS0 853 aaKnown RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 TSPAN18Q96SJ8 248 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 PLVAPQ9BX97 442 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 CDT1Q9H211 546 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 SEMA6BQ9H3T3 888 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 TOPORSQ9NS56 1045 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
CCS-202ENST00000525435 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.54□□□□□ -0.24
CCS-202ENST00000525435 LCHNA4D1U4 455 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 ARL5CA6NH57 179 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 CLTAP09496 248 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 MYBP10242 640 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 GARTP22102 1010 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 BMPR1AP36894 532 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 CASP5P51878 434 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 YARSP54577 528 aaKnown RBP13.53□□□□□ -0.24
CCS-202ENST00000525435 STK4Q13043 487 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 ZNF697Q5TEC3 545 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 GOLGA5Q8TBA6 731 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 HELQQ8TDG4 1101 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 TMEM174Q8WUU8 243 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 SCFD1Q8WVM8 642 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 LPPQ93052 612 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 LRCH3Q96II8 777 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 ZBTB45Q96K62 511 aaPredicted RBP13.53□□□□□ -0.24
CCS-202ENST00000525435 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 NXF3Q9H4D5 531 aaKnown RBP13.53□□□□□ -0.24
CCS-202ENST00000525435 PLEKHA5Q9HAU0 1116 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 SLC39A2Q9NP94 309 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 HES2Q9Y543 173 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 COL4A6Q14031 1691 aa13.53□□□□□ -0.24
CCS-202ENST00000525435 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 RBAK-RBAKDNI3L0D1 243 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 OGTO15294 1046 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.25
CCS-202ENST00000525435 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
CCS-202ENST00000525435 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 IBSPP21815 317 aaPredicted RBP13.52□□□□□ -0.25
CCS-202ENST00000525435 KCNA1Q09470 495 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
CCS-202ENST00000525435 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 SLC39A4Q6P5W5 647 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 ALKAL1Q6UXT8 129 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 HS2ST1Q7LGA3 356 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 CD302Q8IX05 232 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 TMEM192Q8IY95 271 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 HPS3Q969F9 1004 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 GAD1Q99259 594 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
CCS-202ENST00000525435 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 PCDHA5Q9Y5H7 936 aa13.52□□□□□ -0.25
CCS-202ENST00000525435 MRPL42Q9Y6G3 142 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms