RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 CEP57L1Q8IYX8 460 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 KLHL23Q8NBE8 558 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 GDPD5Q8WTR4 605 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 FAM193BQ96PV7 902 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 FIZ1Q96SL8 496 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 C7orf25Q9BPX7 421 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 TMEM175Q9BSA9 504 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 TCHPQ9BT92 498 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 TARS2Q9BW92 718 aaKnown RBP11.1□□□□□ -0.63
TTC39A-213ENST00000524442 TRIM9Q9C026 710 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 STK39Q9UEW8 545 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 TBX20Q9UMR3 447 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 LZTS1Q9Y250 596 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 HPSEQ9Y251 543 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 INPP5FQ9Y2H2 1132 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 HES2Q9Y543 173 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 RALGAPA2Q2PPJ7 1873 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 CHD7Q9P2D1 2997 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
TTC39A-213ENST00000524442 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 ABLIM1O14639 778 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 CLDN3O15551 220 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 FGF18O76093 207 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 ITGB1P05556 798 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MYL1P05976 194 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 IDEP14735 1019 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MLH1P40692 756 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 GRM5P41594 1212 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 SYKP43405 635 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 KRT17Q04695 432 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MCL1Q07820 350 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 KYAT1Q16773 422 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 ZNF568Q3ZCX4 644 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 LONRF3Q496Y0 759 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 TIGD5Q53EQ6 642 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 SFR1Q86XK3 245 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MAP4K3Q8IVH8 894 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 BICD1Q96G01 975 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 RPS6KC1Q96S38 1066 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 GAD1Q99259 594 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 CDT1Q9H211 546 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 NRDE2Q9H7Z3 1164 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 TOPORSQ9NS56 1045 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 PANK4Q9NVE7 773 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 SPG21Q9NZD8 308 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 CHMP5Q9NZZ3 219 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 PARP2Q9UGN5 583 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 PUF60Q9UHX1 559 aaKnown RBP11.09□□□□□ -0.63
TTC39A-213ENST00000524442 EXOC7Q9UPT5 735 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 USP20Q9Y2K6 914 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
TTC39A-213ENST00000524442 TRANK1O15050 2925 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 A0A1B0GVL5 298 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 PVALEFA0A1B0GWK0 134 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 HNRNPDLO14979 420 aaKnown RBP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 GRM6O15303 877 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 NR1I2O75469 434 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 PPP1R37O75864 691 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 RECQL4O94761 1208 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 ALDH2P05091 517 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 AKAP5P24588 427 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 NMT1P30419 496 aaKnown RBP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 LIG4P49917 911 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 YARSP54577 528 aaKnown RBP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 BCAR1P56945 870 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 ASIC1P78348 528 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 GRIK3Q13003 919 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 NOLC1Q14978 699 aaKnown RBP eCLIP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 SLFN12LQ6IEE8 588 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 UNC13DQ70J99 1090 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 GSTCDQ8NEC7 633 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 CCDC34Q96HJ3 373 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 STRA6Q9BX79 667 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 SNTG2Q9NY99 539 aa11.08□□□□□ -0.64
TTC39A-213ENST00000524442 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
TTC39A-213ENST00000524442 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 NCK2O43639 380 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 POMCP01189 267 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 THP07101 528 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 GALTP07902 379 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 SCNN1GP51170 649 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 NDUFA8P51970 172 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 DSC1Q08554 894 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 COASYQ13057 564 aa11.07□□□□□ -0.64
TTC39A-213ENST00000524442 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms