RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 TMEM240Q5SV17 173 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ODR4Q5SWX8 454 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 DNMBPQ6XZF7 1577 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 Q8TCH9 128 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 ARL8AQ96BM9 186 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 MPHOSPH9Q99550 1183 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 AASDHPPTQ9NRN7 309 aa7.82□□□□□ -1.16
CPNE3-206ENST00000523469 SAP30BPQ9UHR5 308 aaKnown RBP7.82□□□□□ -1.16
CPNE3-206ENST00000523469 FAM171A2A8MVW0 826 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 ITGA10O75578 1167 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 COMTP21964 271 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 EPHB1P54762 984 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 MCL1Q07820 350 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 NOMO1Q15155 1222 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 HS1BP3Q53T59 392 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 Q6ZVL8 140 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 THEMISQ8N1K5 641 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-206ENST00000523469 LILRA3Q8N6C8 439 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-206ENST00000523469 HOOK2Q96ED9 719 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 PUS7Q96PZ0 661 aaKnown RBP7.81□□□□□ -1.16
CPNE3-206ENST00000523469 CDC5LQ99459 802 aaKnown RBP7.81□□□□□ -1.16
CPNE3-206ENST00000523469 BCO1Q9HAY6 547 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 CD248Q9HCU0 757 aa7.81□□□□□ -1.16
CPNE3-206ENST00000523469 LUC7L2Q9Y383 392 aaKnown RBP7.81□□□□□ -1.16
CPNE3-206ENST00000523469 ABCC8Q09428 1581 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 ENDOD1O94919 500 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 S100BP04271 92 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-206ENST00000523469 GZMKP49863 264 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 MFSD5Q6N075 450 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 PDZD4Q76G19 769 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-206ENST00000523469 D2HGDHQ8N465 521 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 CPA6Q8N4T0 437 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 CHST13Q8NET6 341 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 OR7D4Q8NG98 312 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 NRG4Q8WWG1 115 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 HOXB13Q92826 284 aaPredicted RBP7.8□□□□□ -1.16
CPNE3-206ENST00000523469 IL17RAQ96F46 866 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 BORCS6Q96GS4 357 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 SMPD4Q9NXE4 827 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 TRPS1Q9UHF7 1281 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 ADGRL1O94910 1474 aa7.8□□□□□ -1.16
CPNE3-206ENST00000523469 E2F8A0AVK6 867 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 HOXA3O43365 443 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 ADKP55263 362 aaKnown RBP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 HHEXQ03014 270 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 MRPL49Q13405 166 aaKnown RBP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 FKBP15Q5T1M5 1219 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 CMTR2Q8IYT2 770 aaKnown RBP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 ZNF512Q96ME7 567 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-206ENST00000523469 DEF6Q9H4E7 631 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 TCF7L1Q9HCS4 588 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 ST6GALNAC2Q9UJ37 374 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 INTUQ9ULD6 942 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 SH3BP1Q9Y3L3 701 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 TCAF1Q9Y4C2 921 aa7.79□□□□□ -1.16
CPNE3-206ENST00000523469 PER3P56645 1201 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-206ENST00000523469 APBA1Q02410 837 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 SEPT2Q15019 361 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 COA7Q96BR5 231 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 FAM89AQ96GI7 184 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 UHRF1Q96T88 793 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-206ENST00000523469 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
CPNE3-206ENST00000523469 THRAP3Q9Y2W1 955 aaKnown RBP7.78□□□□□ -1.16
CPNE3-206ENST00000523469 MAGI1Q96QZ7 1491 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-206ENST00000523469 ABLIM3O94929 683 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 ZRANB2O95218 330 aaKnown RBP eCLIP7.77□□□□□ -1.17
CPNE3-206ENST00000523469 SELENOPP49908 381 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 EFEMP1Q12805 493 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 PIN1Q13526 163 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-206ENST00000523469 MAMDC4Q6UXC1 1216 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 Q6ZSN1 163 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 APBB1IPQ7Z5R6 666 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-206ENST00000523469 ANKRD35Q8N283 1001 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 MIER2Q8N344 545 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 OR2I1PQ8NGU4 316 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 MDM1Q8TC05 714 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 DPF2Q92785 391 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 EDAQ92838 391 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 C8orf49Q96NF6 230 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 C7orf25Q9BPX7 421 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 CSRNP2Q9H175 543 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 EPC1Q9H2F5 836 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 GIT1Q9Y2X7 761 aa7.77□□□□□ -1.17
CPNE3-206ENST00000523469 SYNJ2O15056 1496 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 AKAP10O43572 662 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 STC2O76061 302 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 VCAM1P19320 739 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 ACO1P21399 889 aaKnown RBP7.76□□□□□ -1.17
CPNE3-206ENST00000523469 SREBF1P36956 1147 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 MAGEA10P43363 369 aaPredicted RBP7.76□□□□□ -1.17
CPNE3-206ENST00000523469 RAB27AP51159 221 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 ELAVL1Q15717 326 aaKnown RBP7.76□□□□□ -1.17
CPNE3-206ENST00000523469 SPATS1Q496A3 300 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 PRAMEF14Q5SWL7 426 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 MIGA2Q7L4E1 593 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 SGMS1Q86VZ5 419 aa7.76□□□□□ -1.17
CPNE3-206ENST00000523469 TRMT2AQ8IZ69 625 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms