RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 CDT1Q9H211 546 aa18.56■□□□□ 0.56
TSNARE1-205ENST00000520166 CXCL16Q9H2A7 254 aa18.56■□□□□ 0.56
TSNARE1-205ENST00000520166 TNFSF13BQ9Y275 285 aa18.56■□□□□ 0.56
TSNARE1-205ENST00000520166 A0A1B0GTH6 734 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 A0A1B0GUA9 196 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 ERLIN2O94905 339 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 CD52P31358 61 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 PSMC2P35998 433 aaKnown RBP18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 CDC42EP1Q00587 391 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 MCL1Q07820 350 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 FAAP100Q0VG06 881 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 LPIN1Q14693 890 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 GPNMBQ14956 572 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 SNRNP35Q16560 246 aaKnown RBP18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 MPZL3Q6UWV2 235 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 TMEM174Q8WUU8 243 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 FBXL18Q96ME1 805 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 NOC4LQ9BVI4 516 aaKnown RBP18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 RTN4Q9NQC3 1192 aaKnown RBP18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 ST3GAL5Q9UNP4 418 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 FRMD4BQ9Y2L6 1034 aa18.55■□□□□ 0.56
TSNARE1-205ENST00000520166 PES1O00541 588 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 N4BP3O15049 544 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 KLK7P49862 253 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 NFX1Q12986 1120 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 ZNF568Q3ZCX4 644 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 FBXO47Q5MNV8 452 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 FRMD5Q7Z6J6 570 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 GPD1LQ8N335 351 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 C11orf49Q9H6J7 331 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 TOPORSQ9NS56 1045 aaPredicted RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 RNF19AQ9NV58 838 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 CGNQ9P2M7 1197 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 ARMCX3Q9UH62 379 aaPredicted RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 ATP11BQ9Y2G3 1177 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 HES2Q9Y543 173 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 M0QZ92 97 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 SLC16A3O15427 465 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 RPS6KA5O75582 802 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 EPB41P11171 864 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 SCP2P22307 547 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 ABCD1P33897 745 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 MARSP56192 900 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 SNRPFP62306 86 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 MYBPC2Q14324 1141 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 VWA3BQ502W6 1294 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 DCAF17Q5H9S7 520 aaPredicted RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 FAM26DQ5JW98 314 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 LMBRD2Q68DH5 695 aaPredicted RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 FAM114A1Q8IWE2 563 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 SLC35C1Q96A29 364 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 CCDC127Q96BQ5 260 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 PRIMPOLQ96LW4 560 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 MMRN2Q9H8L6 949 aa18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 PIN4Q9Y237 131 aaKnown RBP18.54■□□□□ 0.56
TSNARE1-205ENST00000520166 EXTL3O43909 919 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 MGEA5O60502 916 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 LRRN2O75325 713 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 NPTXRO95502 500 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 APBA1Q02410 837 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 SPAG1Q07617 926 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 UBXN11Q5T124 520 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 TCERG1LQ5VWI1 586 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 SLFN12LQ6IEE8 588 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 ANKRD33Q7Z3H0 272 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 TMX1Q9H3N1 280 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 AGPAT5Q9NUQ2 364 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 PADI3Q9ULW8 664 aa18.53■□□□□ 0.56
TSNARE1-205ENST00000520166 GNA14O95837 355 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 CYP24A1Q07973 514 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 KCNH2Q12809 1159 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 MAN2A1Q16706 1144 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 ELMO3Q96BJ8 720 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 MFSD14AQ96MC6 490 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 NDST4Q9H3R1 872 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 PDE11AQ9HCR9 933 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 PTPRJQ12913 1337 aa18.52■□□□□ 0.56
TSNARE1-205ENST00000520166 SFPQP23246 707 aaKnown RBP eCLIP18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 UBXN1Q04323 297 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 PPP3CAQ08209 521 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 TCTN1Q2MV58 587 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 ANKLE1Q8NAG6 615 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 SCLYQ96I15 445 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 MKNK1Q9BUB5 465 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 PPP1R12CQ9BZL4 782 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 ERVK-5Q9HDB9 667 aa18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.55
TSNARE1-205ENST00000520166 LRRIQ3A6PVS8 624 aaPredicted RBP18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 LGALS16A8MUM7 142 aa18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 OGTO15294 1046 aa18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 NBNO60934 754 aa18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 CYP2C18P33260 490 aa18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 PBX1P40424 430 aa18.51■□□□□ 0.55
TSNARE1-205ENST00000520166 VAMP7P51809 220 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms