RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 HELQQ8TDG4 1101 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 FAM161BQ96MY7 647 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 TSPAN18Q96SJ8 248 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 ADPGKQ9BRR6 497 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 CDT1Q9H211 546 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 FAM13BQ9NYF5 915 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 IRAK3Q9Y616 596 aa12.66□□□□□ -0.38
SPIDR-212ENST00000519661 PRRC2BQ5JSZ5 2229 aaKnown RBP12.66□□□□□ -0.38
SPIDR-212ENST00000519661 NLRC5Q86WI3 1866 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 MYO9BQ13459 2157 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 FSCN2O14926 492 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 PFKFB1P16118 471 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 CTNNB1P35222 781 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 AFF1P51825 1210 aaKnown RBP12.65□□□□□ -0.38
SPIDR-212ENST00000519661 RAD51AP2Q09MP3 1159 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 GRIK3Q13003 919 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 KYAT1Q16773 422 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 PTPROQ16827 1216 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 TIGD5Q53EQ6 642 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 KCNT2Q6UVM3 1135 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 FAM178BQ8IXR5 827 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 KLHL23Q8NBE8 558 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 LPPQ93052 612 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 ZNF558Q96NG5 402 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 POLD4Q9HCU8 107 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
SPIDR-212ENST00000519661 SPTBN5Q9NRC6 3674 aaKnown RBP12.65□□□□□ -0.38
SPIDR-212ENST00000519661 KIAA1671Q9BY89 1806 aa12.65□□□□□ -0.39
SPIDR-212ENST00000519661 REV3LO60673 3130 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 A0A0B4J269 797 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 PTGESO14684 152 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 GRM6O15303 877 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 POLR2DO15514 142 aaKnown RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 B4GALT3O60512 393 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 NPTXRO95502 500 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 GALTP07902 379 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 KCNE1P15382 129 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 STRN3Q13033 797 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 GPM6BQ13491 265 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 SLC39A4Q6P5W5 647 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 EPM2AIP1Q7L775 607 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 ELOA2Q8IYF1 753 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 COLGALT2Q8IYK4 626 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 MYCT1Q8N699 235 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 PDILTQ8N807 584 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 MAFAQ8NHW3 353 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 URGCPQ8TCY9 931 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 CHAMP1Q96JM3 812 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 TARS2Q9BW92 718 aaKnown RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 TRIM6Q9C030 488 aaPredicted RBP12.64□□□□□ -0.39
SPIDR-212ENST00000519661 NRDE2Q9H7Z3 1164 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 HES2Q9Y543 173 aa12.64□□□□□ -0.39
SPIDR-212ENST00000519661 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 TMEM189-UBE2V1I3L0A0 370 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 RFXAPO00287 272 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 FGF18O76093 207 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 RECQL4O94761 1208 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 DDHD2O94830 711 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 C1RP00736 705 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 KRT18P05783 430 aaKnown RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 DNAJB1P25685 340 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 ANP32AP39687 249 aaKnown RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 MLH1P40692 756 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 BCAR1P56945 870 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 NOLC1Q14978 699 aaKnown RBP eCLIP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 CTC1Q2NKJ3 1217 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 FOXD4L6Q3SYB3 417 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 ZNF568Q3ZCX4 644 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 PAN2Q504Q3 1202 aaKnown RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 FOXD4L3Q6VB84 417 aaPredicted RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 CCDC65Q8IXS2 484 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 ENGASEQ8NFI3 743 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 DHX58Q96C10 678 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 IGSF21Q96ID5 467 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 PPP1R10Q96QC0 940 aaKnown RBP12.63□□□□□ -0.39
SPIDR-212ENST00000519661 GAD1Q99259 594 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 HAPLN2Q9GZV7 340 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 PLEKHA5Q9HAU0 1116 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 SPG21Q9NZD8 308 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 XIRP2A4UGR9 3374 aa12.63□□□□□ -0.39
SPIDR-212ENST00000519661 UBE4BO95155 1302 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 K7ENM7 598 aa12.62□□□□□ -0.39
SPIDR-212ENST00000519661 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms