RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 HDAC5Q9UQL6 1122 aa5.07□□□□□ -1.6
SKP1-205ENST00000519054 XDHP47989 1333 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 GOLGA6L6A8MZA4 724 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 GASTP01350 101 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 TACR2P21452 398 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 CRHR1P34998 444 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 PTH1RQ03431 593 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 PPP3CAQ08209 521 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 MALLQ13021 153 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 NOMO1Q15155 1222 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 INAVAQ3KP66 663 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 MIIPQ5JXC2 388 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 SYDE2Q5VT97 1194 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 CRIP3Q6Q6R5 217 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 Q6ZVL8 140 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 PPM1NQ8N819 430 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 CACTINQ8WUQ7 758 aaKnown RBP5.06□□□□□ -1.6
SKP1-205ENST00000519054 CEP95Q96GE4 821 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 RBM12Q9NTZ6 932 aaKnown RBP5.06□□□□□ -1.6
SKP1-205ENST00000519054 DNM3Q9UQ16 869 aa5.06□□□□□ -1.6
SKP1-205ENST00000519054 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 FAM20BO75063 409 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 MYBL2P10244 700 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 HSP90B1P14625 803 aaKnown RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 GSPT1P15170 499 aaKnown RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 AGXTP21549 392 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 ECHS1P30084 290 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 PTPN7P35236 360 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 MCAMP43121 646 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 PER3P56645 1201 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 ACAP2Q15057 778 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 LSM12Q3MHD2 195 aaKnown RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 DCAF17Q5H9S7 520 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 MFSD14BQ5SR56 506 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 ANKS6Q68DC2 871 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 FAM180AQ6UWF9 173 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 PDZD4Q76G19 769 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 DOK3Q7L591 496 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 Q8N1X5 172 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 C1orf162Q8NEQ5 155 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 OR52N2Q8NGI0 321 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 UHRF1Q96T88 793 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 ZNF703Q9H7S9 590 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 SPON1Q9HCB6 807 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 ZNF277Q9NRM2 450 aaPredicted RBP5.05□□□□□ -1.6
SKP1-205ENST00000519054 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 MKS1Q9NXB0 559 aa5.05□□□□□ -1.6
SKP1-205ENST00000519054 ANKRD62A6NC57 917 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 PRR5-ARHGAP8B1AHC4 643 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 NPIPB8E9PQR5 432 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 FSHBP01225 129 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 TOB2Q14106 344 aaPredicted RBP5.04□□□□□ -1.6
SKP1-205ENST00000519054 PTPROQ16827 1216 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 HTR3DQ70Z44 454 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 TRMT2AQ8IZ69 625 aaKnown RBP5.04□□□□□ -1.6
SKP1-205ENST00000519054 FAM177A1Q8N128 213 aaPredicted RBP5.04□□□□□ -1.6
SKP1-205ENST00000519054 PQLC1Q8N2U9 271 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 OR7D4Q8NG98 312 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 ZCRB1Q8TBF4 217 aaKnown RBP5.04□□□□□ -1.6
SKP1-205ENST00000519054 FAXDC2Q96IV6 333 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 PDCD2LQ9BRP1 358 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 LDAHQ9H6V9 325 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 BCO1Q9HAY6 547 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 HS3ST3A1Q9Y663 406 aa5.04□□□□□ -1.6
SKP1-205ENST00000519054 B5MCH6 92 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 ALG1L2C9J202 215 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 WNT10BO00744 389 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 GABRDO14764 452 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 XPOTO43592 962 aaKnown RBP5.03□□□□□ -1.6
SKP1-205ENST00000519054 SREBF1P36956 1147 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 PTTG1IPP53801 180 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 TUBA3CQ13748 450 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 SEPT2Q15019 361 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 VPS72Q15906 364 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 RABL3Q5HYI8 236 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 NAIF1Q69YI7 327 aaPredicted RBP5.03□□□□□ -1.6
SKP1-205ENST00000519054 IGFL4Q6B9Z1 124 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 TUBA3EQ6PEY2 450 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 GPRIN1Q7Z2K8 1008 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 RNF169Q8NCN4 708 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 STON2Q8WXE9 905 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 JADE3Q92613 823 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 HOXB13Q92826 284 aaPredicted RBP5.03□□□□□ -1.6
SKP1-205ENST00000519054 GPATCH3Q96I76 525 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 SMAD5Q99717 465 aaKnown RBP5.03□□□□□ -1.6
SKP1-205ENST00000519054 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 TMPRSS5Q9H3S3 457 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 EIF2B4Q9UI10 523 aaKnown RBP5.03□□□□□ -1.6
SKP1-205ENST00000519054 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
SKP1-205ENST00000519054 WASHC2CQ9Y4E1 1318 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 FZD7O75084 574 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 RPS6KA4O75676 772 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 ZNF202O95125 648 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 FLT3LGP49771 235 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 SLC25A3Q00325 362 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 MGAT2Q10469 447 aa5.02□□□□□ -1.61
SKP1-205ENST00000519054 PCBP2Q15366 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms