RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 HNRNPLP14866 589 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 BLOC1S1P78537 153 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 MPP3Q13368 585 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 DDB1Q16531 1140 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 DDR2Q16832 855 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 ABHD17BQ5VST6 288 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 SLFN12LQ6IEE8 588 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 RTN4RL1Q86UN2 441 aaPredicted RBP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 MCF2L2Q86YR7 1114 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 CPEB3Q8NE35 698 aaKnown RBP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 DLG3Q92796 817 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 SYNPO2Q9UMS6 1093 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 ABCC1P33527 1531 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 LRRC7Q96NW7 1537 aa4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 COL3A1P02461 1466 aaPredicted RBP4.29□□□□□ -1.72
ATP6V1C1-204ENST00000518959 MYO3AQ8NEV4 1616 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 RNF17Q9BXT8 1623 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 ABCC3O15438 1527 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 CDK13Q14004 1512 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 DNAJC6O75061 913 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 MATN4O95460 622 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 CRTAMO95727 393 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 HLA-DOAP06340 250 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 TCF3P15923 654 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 BMPR1AP36894 532 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 SUMO1P63165 101 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 GNL2Q13823 731 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 BEAN1Q3B7T3 259 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 METTL24Q5JXM2 366 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 BRAPQ7Z569 592 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 PLXDC1Q8IUK5 500 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 OR52N2Q8NGI0 321 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 HNRNPLLQ8WVV9 542 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 ANKS1AQ92625 1134 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 FOXRED1Q96CU9 486 aaPredicted RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 ZNF778Q96MU6 729 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 UIMC1Q96RL1 719 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 PDCD2LQ9BRP1 358 aa4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 CFDP1Q9UEE9 299 aaPredicted RBP4.28□□□□□ -1.72
ATP6V1C1-204ENST00000518959 PLXNC1O60486 1568 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 UGGT1Q9NYU2 1555 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MYO5CQ9NQX4 1742 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 NRP1O14786 923 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 DDX6P26196 483 aaKnown RBP eCLIP4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 RNASE9P60153 205 aaKnown RBP4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 NHLH1Q02575 133 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ST13P5Q8NFI4 369 aaPredicted RBP4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 OR5M3Q8NGP4 307 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 HAPLN2Q9GZV7 340 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 RNF181Q9P0P0 153 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 COQ6Q9Y2Z9 468 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 DNMT1P26358 1616 aaKnown RBP4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 VWDEQ8N2E2 1590 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MSH6P52701 1360 aa4.27□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SIGLEC1Q9BZZ2 1709 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ATP7AQ04656 1500 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ABCA6Q8N139 1617 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 TRBV23-1A0A0A0MS06 115 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MTSS1O43312 755 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 KLF4O43474 513 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 PRLP01236 227 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 TSPY4P0CV99 314 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 TSPY10P0CW01 314 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 KCNA6P17658 529 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 GABREP78334 506 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ARID5AQ03989 594 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 TP53BP2Q13625 1128 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 PRAMEF9Q5VWM5 478 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 C1QL2Q7Z5L3 287 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 BMP8AQ7Z5Y6 402 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 WASF1Q92558 559 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MAML3Q96JK9 1138 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 GMLQ99445 158 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 C1QTNF7Q9BXJ2 289 aa4.26□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SRCAPQ6ZRS2 3230 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SCAF11Q99590 1463 aaKnown RBP4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 PRR5-ARHGAP8B1AHC4 643 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 LEFTY2O00292 366 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 KIF3BO15066 747 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SPATA31D3P0C874 917 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ITGAMP11215 1152 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MPLP40238 635 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 MXRA7P84157 204 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 IRF9Q00978 393 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SPATA31D4Q6ZUB0 917 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SAMD9LQ8IVG5 1584 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SLC43A3Q8NBI5 491 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 CASKIN1Q8WXD9 1431 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ASB10Q8WXI3 467 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 RPGRQ92834 1020 aaKnown RBP4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SPATA9Q9BWV2 254 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 SPON1Q9HCB6 807 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ACSS2Q9NR19 701 aa4.25□□□□□ -1.73
ATP6V1C1-204ENST00000518959 ING3Q9NXR8 418 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms