RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 ATP2A2P16615 1042 aaKnown RBP25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 BMP6P22004 513 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 NELFCDQ8IXH7 590 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 HACE1Q8IYU2 909 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 ZBTB45Q96K62 511 aaPredicted RBP25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 TCHPQ9BT92 498 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 HAPLN2Q9GZV7 340 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 KCTD10Q9H3F6 313 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 NXF3Q9H4D5 531 aaKnown RBP25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 CITO14578 2027 aa25.04■■□□□ 1.6
NKX6-3-201ENST00000518699 A0A0B4J269 797 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 BIN1O00499 593 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 TGFB1I1O43294 461 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 GJB5O95377 273 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 GARTP22102 1010 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 PPP1R2P41236 205 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 SKOR2Q2VWA4 1001 aaPredicted RBP25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 HERC6Q8IVU3 1022 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 PGBD4Q96DM1 585 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 CGNQ9P2M7 1197 aaKnown RBP25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 LRFN2Q9ULH4 789 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 PCDHB7Q9Y5E2 793 aa25.03■■□□□ 1.6
NKX6-3-201ENST00000518699 FAM189A1O60320 539 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 ADSSP30520 456 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 GRM5P41594 1212 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 PRCPP42785 496 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 CAVIN1Q6NZI2 390 aaKnown RBP25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 HS2ST1Q7LGA3 356 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 ZBTB33Q86T24 672 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 GOLGA5Q8TBA6 731 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 RSPH1Q8WYR4 309 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 RC3H2Q9HBD1 1191 aaKnown RBP25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 AGPAT3Q9NRZ7 376 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 RNF19AQ9NV58 838 aa25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 TYW1Q9NV66 732 aaKnown RBP25.02■■□□□ 1.6
NKX6-3-201ENST00000518699 PDCD11Q14690 1871 aaKnown RBP25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 HOXA2O43364 376 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 C12orf56Q8IXR9 622 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 ADSSL1Q8N142 457 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 MSTO1Q9BUK6 570 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 MAPK8IP1Q9UQF2 711 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 COLQQ9Y215 455 aaPredicted RBP25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 HES2Q9Y543 173 aa25.01■■□□□ 1.59
NKX6-3-201ENST00000518699 ANK1P16157 1881 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 PDXKO00764 312 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 KIAA0391O15091 583 aaKnown RBP25■■□□□ 1.59
NKX6-3-201ENST00000518699 OGTO15294 1046 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 DGKIO75912 1065 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 ITGA4P13612 1032 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 MATR3P43243 847 aaKnown RBP eCLIP25■■□□□ 1.59
NKX6-3-201ENST00000518699 HTRA4P83105 476 aaPredicted RBP25■■□□□ 1.59
NKX6-3-201ENST00000518699 KYAT1Q16773 422 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 ISM2Q6H9L7 571 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 ARMCX5Q6P1M9 558 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 TMCO2Q7Z6W1 182 aaPredicted RBP25■■□□□ 1.59
NKX6-3-201ENST00000518699 CEP120Q8N960 986 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 TMEM174Q8WUU8 243 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 POMGNT1Q8WZA1 660 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 UBN1Q9NPG3 1134 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 TRAF3IP3Q9Y228 551 aa25■■□□□ 1.59
NKX6-3-201ENST00000518699 RANBP2P49792 3224 aaKnown RBP24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 MEIS3P2A8K0S8 358 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 INPPL1O15357 1258 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 UPP2O95045 317 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 HARSP12081 509 aaKnown RBP24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 STIM1Q13586 685 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 ZCWPW2Q504Y3 356 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 CLLU1OSQ5K130 101 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 AGMOQ6ZNB7 445 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 RNF169Q8NCN4 708 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 LPPQ93052 612 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 CBWD1Q9BRT8 395 aa24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 AGO2Q9UKV8 859 aaKnown RBP24.99■■□□□ 1.59
NKX6-3-201ENST00000518699 TDRD15B5MCY1 1934 aaKnown RBP24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 RECQL4O94761 1208 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 FGFR1P11362 822 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 IBSPP21815 317 aaPredicted RBP24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 NFIL3Q16649 462 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 FAM109BQ6ICB4 259 aaPredicted RBP24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 ZNF689Q96CS4 500 aaPredicted RBP24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 CCDC94Q9BW85 323 aaPredicted RBP24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 RNF39Q9H2S5 420 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 RSAD1Q9HA92 442 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 GIT1Q9Y2X7 761 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 TRIP11Q15643 1979 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 KIAA1671Q9BY89 1806 aa24.98■■□□□ 1.59
NKX6-3-201ENST00000518699 PSMA7O14818 248 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 CD44P16070 742 aaKnown RBP24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 THNSL1Q8IYQ7 743 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 DHTKD1Q96HY7 919 aaPredicted RBP24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 APOL6Q9BWW8 343 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 TMEM117Q9H0C3 514 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 SEMA6BQ9H3T3 888 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 SNTG2Q9NY99 539 aa24.97■■□□□ 1.59
NKX6-3-201ENST00000518699 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.96■■□□□ 1.59
NKX6-3-201ENST00000518699 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.96■■□□□ 1.59
NKX6-3-201ENST00000518699 PPP1R3GB7ZBB8 358 aa24.96■■□□□ 1.59
NKX6-3-201ENST00000518699 CALUO43852 315 aaPredicted RBP24.96■■□□□ 1.59
NKX6-3-201ENST00000518699 CLTAP09496 248 aa24.96■■□□□ 1.59
NKX6-3-201ENST00000518699 AKAP5P24588 427 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms