RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 ZBTB33Q86T24 672 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 CABP7Q86V35 215 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 RNF135Q8IUD6 432 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 IGSF22Q8N9C0 903 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 LRFN3Q9BTN0 628 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 PHF7Q9BWX1 381 aaPredicted RBP11.67□□□□□ -0.54
SPIDR-205ENST00000518060 VN1R3Q9BXE9 311 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 PDZD7Q9H5P4 517 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 MRPL17Q9NRX2 175 aaKnown RBP11.67□□□□□ -0.54
SPIDR-205ENST00000518060 STK39Q9UEW8 545 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 CDH22Q9UJ99 828 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 GIT1Q9Y2X7 761 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 HCN4Q9Y3Q4 1203 aa11.67□□□□□ -0.54
SPIDR-205ENST00000518060 F8W810 466 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 HIP1RO75146 1068 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 WEE2P0C1S8 567 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 EPCAMP16422 314 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 HOXB8P17481 243 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-205ENST00000518060 EFNA5P52803 228 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 PEX3P56589 373 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-205ENST00000518060 RAD51AP2Q09MP3 1159 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 GRIK3Q13003 919 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 DMP1Q13316 513 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-205ENST00000518060 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-205ENST00000518060 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 C12orf76Q8N812 135 aaPredicted RBP11.66□□□□□ -0.54
SPIDR-205ENST00000518060 RABGGTAQ92696 567 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 DRC1Q96MC2 740 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 RUSC1Q9BVN2 902 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 HERC2P3Q9BVR0 1158 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 COLEC11Q9BWP8 271 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 FZD8Q9H461 694 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 DZANK1Q9NVP4 752 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 MARCH5Q9NX47 278 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 MIOSQ9NXC5 875 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 SNTG2Q9NY99 539 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 GDAQ9Y2T3 454 aa11.66□□□□□ -0.54
SPIDR-205ENST00000518060 CASTOR2A6NHX0 329 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 K7ERI5 159 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 ACKR2O00590 384 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 TADA2AO75478 443 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 RECQL4O94761 1208 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 SOD2P04179 222 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 MYBP10242 640 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 HARSP12081 509 aaKnown RBP11.65□□□□□ -0.54
SPIDR-205ENST00000518060 GLUD2P49448 558 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 ATF7IP2Q5U623 682 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 EEF1DP3Q658K8 133 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 KCNK18Q7Z418 384 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 PPFIBP1Q86W92 1011 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 HASPINQ8TF76 798 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 SUSD6Q92537 303 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 B3GALT6Q96L58 329 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 RIPOR3Q96MK2 946 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 CCDC113Q9H0I3 377 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 S1PR5Q9H228 398 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 C11orf16Q9NQ32 467 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 KMT5AQ9NQR1 393 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 CACNG4Q9UBN1 327 aa11.65□□□□□ -0.54
SPIDR-205ENST00000518060 PHLPP2Q6ZVD8 1323 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 INPPL1O15357 1258 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 GPR37L1O60883 481 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 EDN1P05305 212 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 ADH1AP07327 375 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
SPIDR-205ENST00000518060 OSTNP61366 133 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 ITIH3Q06033 890 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 DSC1Q08554 894 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 TUSC3Q13454 348 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 KCNC3Q14003 757 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
SPIDR-205ENST00000518060 DCAF4L1Q3SXM0 396 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 ZNF568Q3ZCX4 644 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 TMC5Q6UXY8 1006 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 TAS1R1Q7RTX1 841 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 KLHL5Q96PQ7 755 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 MMTAG2Q9BU76 263 aaKnown RBP11.64□□□□□ -0.55
SPIDR-205ENST00000518060 NT5C3AQ9H0P0 336 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 ADAM7Q9H2U9 754 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 FOXD4L1Q9NU39 408 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 SSX2IPQ9Y2D8 614 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 IRAK3Q9Y616 596 aa11.64□□□□□ -0.55
SPIDR-205ENST00000518060 SFI1A8K8P3 1242 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 PRR33A8MZF0 331 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 LOC730098B7Z3J9 87 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 SLC16A4O15374 487 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 GLUD1P00367 558 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 PDCP20941 246 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 UBA7P41226 1012 aa11.63□□□□□ -0.55
SPIDR-205ENST00000518060 MTHFRP42898 656 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms