RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 MAMDC4Q6UXC1 1216 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 ARMCX2Q7L311 632 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 EEPD1Q7L9B9 569 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 ZBTB8OSQ8IWT0 167 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 MSL3Q8N5Y2 521 aaKnown RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 LRRN4CLQ8ND94 238 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 FBXL13Q8NEE6 735 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 ASAP3Q8TDY4 903 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 ZNF526Q8TF50 670 aaPredicted RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 EMID1Q96A84 441 aaPredicted RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 KIFC3Q9BVG8 833 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 ZNF408Q9H9D4 720 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 EFCC1Q9HA90 598 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 AGO2Q9UKV8 859 aaKnown RBP11.63□□□□□ -0.55
CPEB4-203ENST00000517880 TFR2Q9UP52 801 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 PCDHGC5Q9Y5F6 944 aa11.63□□□□□ -0.55
CPEB4-203ENST00000517880 LRRIQ3A6PVS8 624 aaPredicted RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 FOXN3O00409 490 aaPredicted RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 CES2O00748 559 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 ENC1O14682 589 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 MAPK4P31152 587 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 POU5F1BQ06416 359 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 GRM1Q13255 1194 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 IRF5Q13568 498 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 BRD3Q15059 726 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 PLCB4Q15147 1175 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 SURF1Q15526 300 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 ENOX2Q16206 610 aaKnown RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 TEX35Q5T0J7 233 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 SYCE1Q8N0S2 351 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 MSANTD4Q8NCY6 345 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 PLEKHO2Q8TD55 490 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 BRI3BPQ8WY22 251 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 SAAL1Q96ER3 474 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 NT5C1BQ96P26 610 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 SYT11Q9BT88 431 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 GPR88Q9GZN0 384 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 R3HDMLQ9H3Y0 253 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 ZCCHC17Q9NP64 241 aaKnown RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 ERAP1Q9NZ08 941 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 AJAP1Q9UKB5 411 aaPredicted RBP11.62□□□□□ -0.55
CPEB4-203ENST00000517880 SIP14410 1827 aa11.62□□□□□ -0.55
CPEB4-203ENST00000517880 A0A0B4J269 797 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 DDX3XO00571 662 aaKnown RBP eCLIP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 MAGEB2O15479 319 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 TMEM253P0C7T8 217 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 KLRC1P26715 233 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 ADORA2AP29274 412 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 PAFAH1B1P43034 410 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 MAP2K1Q02750 393 aaPredicted RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 ARHGAP44Q17R89 818 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 FAM110CQ1W6H9 321 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 HSDL1Q3SXM5 330 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 CDCA2Q69YH5 1023 aaPredicted RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 CCDC70Q6NSX1 233 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 FBXO38Q6PIJ6 1188 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 C15orf39Q6ZRI6 1047 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 FBXO16Q8IX29 292 aaPredicted RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 U2AF1L4Q8WU68 220 aaKnown RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 FAM213AQ9BRX8 229 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 MRPL4Q9BYD3 311 aaKnown RBP11.61□□□□□ -0.55
CPEB4-203ENST00000517880 CAPN6Q9Y6Q1 641 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 COL1A2P08123 1366 aa11.61□□□□□ -0.55
CPEB4-203ENST00000517880 SLC15A5A6NIM6 579 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 TTLL13PA6NNM8 815 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 PPFIA4O75335 1185 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 CELF2O95319 508 aaKnown RBP11.6□□□□□ -0.55
CPEB4-203ENST00000517880 GZMAP12544 262 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 BPIFB4P59827 614 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 GCNT1Q02742 428 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 ARHGAP1Q07960 439 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 CAPSQ13938 189 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 TCEAL1Q15170 157 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 MEI1Q5TIA1 1274 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 TMCO3Q6UWJ1 677 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 PLEKHH3Q7Z736 793 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 DPP9Q86TI2 863 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 ARHGEF19Q8IW93 802 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 ZSWIM2Q8NEG5 633 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 PPTC7Q8NI37 304 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 CAGE1Q8TC20 777 aa11.6□□□□□ -0.55
CPEB4-203ENST00000517880 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
CPEB4-203ENST00000517880 SHC3Q92529 594 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms