RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 OSGEPQ9NPF4 335 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 IL17RBQ9NRM6 502 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SCINQ9Y6U3 715 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 FLT1P17948 1338 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 CLDN3O15551 220 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 VEGFAP15692 232 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 PPP4CP60510 307 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 GRAPQ13588 217 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 PCGF5Q86SE9 256 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 NME8Q8N427 588 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 RASGEF1CQ8N431 466 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 GRAPLQ8TC17 118 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 EIF2AK1Q9BQI3 630 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TUFT1Q9NNX1 390 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 UBN1Q9NPG3 1134 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ABCF3Q9NUQ8 709 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TACC3Q9Y6A5 838 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 EMSYQ7Z589 1322 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 N4BP2Q86UW6 1770 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 H0YCG3 227 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 DDX3XO00571 662 aaKnown RBP eCLIP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 LIN7AO14910 233 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TPD52L2O43399 206 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SKAP2O75563 359 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ACADSP16219 412 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ITGA8P53708 1063 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 QRICH1Q2TAL8 776 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SYDE2Q5VT97 1194 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SDCCAG8Q86SQ7 713 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TEKT4Q8WW24 435 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ATP2A3Q93084 1043 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 HEMGNQ9BXL5 484 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 CDC42EP4Q9H3Q1 356 aaKnown RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 ANKFY1Q9P2R3 1169 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 TTC7AQ9ULT0 858 aaPredicted RBP7.1□□□□□ -1.27
CPNE3-203ENST00000517490 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
CPNE3-203ENST00000517490 SPECC1L-ADORA2AF8WAN1 911 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 P4HA2O15460 535 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 SNUPNO95149 360 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 GSTA2P09210 222 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 NMT1P30419 496 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 HSPA1LP34931 641 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 KCNJ1P48048 391 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 PRELPP51888 382 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ARL4CP56559 192 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CENPCQ03188 943 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DMP1Q13316 513 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CUL3Q13618 768 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CNGA2Q16280 664 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 WASHC2DQ5SRD0 308 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ATG16L1Q676U5 607 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DUPD1Q68J44 220 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 MIGA2Q7L4E1 593 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 PPP4R1Q8TF05 950 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 HES6Q96HZ4 224 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 TCHPQ9BT92 498 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DNAI2Q9GZS0 605 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 THEGQ9P2T0 379 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 SLC12A6Q9UHW9 1150 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DCTN4Q9UJW0 460 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CFAP69A5D8W1 941 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 TLR2O60603 784 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ABL2P42684 1182 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 RPL21P46778 160 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 YWHAGP61981 247 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 AP2B1P63010 937 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 EPHA7Q15375 998 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ASTE1Q2TB18 679 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ANKRD20A2Q5SQ80 823 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ANKRD20A1Q5TYW2 823 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 C6orf89Q6UWU4 347 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 BRINP3Q76B58 766 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 RHOT1Q8IXI2 618 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 PDIK1LQ8N165 341 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 ZBTB10Q96DT7 871 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 RBM15Q96T37 977 aaKnown RBP eCLIP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 RIOX1Q9H6W3 641 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DCLRE1BQ9H816 532 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CORO1CQ9ULV4 474 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 THRAP3Q9Y2W1 955 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CYTH3O43739 400 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 AKAP3O75969 853 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 GIT2Q14161 759 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 BZW1Q7L1Q6 419 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 POMGNT1Q8WZA1 660 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 TLCD1Q96CP7 247 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DYDC2Q96IM9 177 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 MMTAG2Q9BU76 263 aaKnown RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 JMJD4Q9H9V9 463 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 DLGAP2Q9P1A6 1054 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 CCNL1Q9UK58 526 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-203ENST00000517490 TUBGCP6Q96RT7 1819 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 AFF2P51816 1311 aa7.09□□□□□ -1.27
CPNE3-203ENST00000517490 PFDN1O60925 122 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 STAM2O75886 525 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 TTC4O95801 387 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 SHBGP04278 402 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 KCNA3P22001 575 aa7.09□□□□□ -1.28
CPNE3-203ENST00000517490 TARSP26639 723 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms