RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 MAP4K1Q92918 833 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 LENG9Q96B70 501 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 GLT8D2Q9H1C3 349 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 RNF39Q9H2S5 420 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 CHRDQ9H2X0 955 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 BARHL2Q9NY43 387 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 MRPS17Q9Y2R5 130 aaKnown RBP13.26□□□□□ -0.29
CSF1R-208ENST00000515239 SLC12A7Q9Y666 1083 aa13.26□□□□□ -0.29
CSF1R-208ENST00000515239 V9GY48 417 aaPredicted RBP13.26□□□□□ -0.29
CSF1R-208ENST00000515239 CNTNAP5Q8WYK1 1306 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 ARL5CA6NH57 179 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 MAFO75444 373 aaPredicted RBP13.25□□□□□ -0.29
CSF1R-208ENST00000515239 MCM5P33992 734 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 PRR16Q569H4 304 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 IL31Q6EBC2 164 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 FUT10Q6P4F1 479 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 POTEHQ6S545 545 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 GAD1Q99259 594 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 COLEC11Q9BWP8 271 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 FBXW11Q9UKB1 542 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 NOTCH4Q99466 2003 aa13.25□□□□□ -0.29
CSF1R-208ENST00000515239 CCL16O15467 120 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 EDIL3O43854 480 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 FOXD2O60548 495 aaPredicted RBP13.24□□□□□ -0.29
CSF1R-208ENST00000515239 ECI2O75521 394 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 CIITAP33076 1130 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 LIMK1P53667 647 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
CSF1R-208ENST00000515239 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 ZFP42Q96MM3 310 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 NLRP4Q96MN2 994 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 CLSTN3Q9BQT9 956 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 MINDY3Q9H8M7 445 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 UBN1Q9NPG3 1134 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
CSF1R-208ENST00000515239 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 SPEGQ15772 3267 aa13.24□□□□□ -0.29
CSF1R-208ENST00000515239 C1QTNF9BB2RNN3 333 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 hCG_1984214I3L0E3 225 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 MSH4O15457 936 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 C1QTNF9P0C862 333 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 ITGA4P13612 1032 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 CHMLP26374 656 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 HOXA9P31269 272 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 SFNP31947 248 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 SCNN1GP51170 649 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
CSF1R-208ENST00000515239 PPP2R5DQ14738 602 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 RTP2Q5QGT7 225 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 PPM1LQ5SGD2 360 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 SGMS1Q86VZ5 419 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
CSF1R-208ENST00000515239 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
CSF1R-208ENST00000515239 GSTCDQ8NEC7 633 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 COL26A1Q96A83 441 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 RIT2Q99578 217 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 UNC45AQ9H3U1 944 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 LMAN1LQ9HAT1 526 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 DNMT3BQ9UBC3 853 aaKnown RBP13.23□□□□□ -0.29
CSF1R-208ENST00000515239 KCNH3Q9ULD8 1083 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 NDRG2Q9UN36 371 aaKnown RBP13.23□□□□□ -0.29
CSF1R-208ENST00000515239 POLIQ9UNA4 740 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 IPPQ9Y573 584 aa13.23□□□□□ -0.29
CSF1R-208ENST00000515239 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 NR1I2O75469 434 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 IGHDP01880 384 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 C8AP07357 584 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 MLH1P40692 756 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 FNTBP49356 437 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 CCR3P51677 355 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 JAK3P52333 1124 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 SATB1Q01826 763 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 CREMQ03060 361 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 TANGO2Q6ICL3 276 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 SRGAP1Q7Z6B7 1085 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 CNNM3Q8NE01 707 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 RABGGTAQ92696 567 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 SLC5A5Q92911 643 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 GJA10Q969M2 543 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 IER2Q9BTL4 223 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
CSF1R-208ENST00000515239 LRRC2Q9BYS8 371 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 RXFP3Q9NSD7 469 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 ADAM28Q9UKQ2 775 aa13.22□□□□□ -0.29
CSF1R-208ENST00000515239 RBM8AQ9Y5S9 174 aaKnown RBP13.22□□□□□ -0.29
CSF1R-208ENST00000515239 SDK1Q7Z5N4 2213 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 MAN2B1O00754 1011 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 SGSM2O43147 1006 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 ADAM12O43184 909 aa13.21□□□□□ -0.29
CSF1R-208ENST00000515239 CHMP2AO43633 222 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms