RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 GRM4Q14833 912 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 PPM1LQ5SGD2 360 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 IFIT1BQ5T764 474 aaKnown RBP8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 LIN9Q5TKA1 542 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 TANGO2Q6ICL3 276 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 EFCAB12Q6NXP0 572 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 AGMOQ6ZNB7 445 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 MAP4K3Q8IVH8 894 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 GLYCTKQ8IVS8 523 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 IRF7Q92985 503 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 PGBD4Q96DM1 585 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 MSANTD3Q96H12 275 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 ZNF668Q96K58 619 aaPredicted RBP8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 HNRNPABQ99729 332 aaKnown RBP8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 ZNF334Q9HCZ1 680 aaPredicted RBP8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 TMEM9BQ9NQ34 198 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 C2orf42Q9NWW7 574 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 GDE1Q9NZC3 331 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 ZSWIM5Q9P217 1185 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 DDX19BQ9UMR2 479 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 KALRNO60229 2985 aa8.74□□□□□ -1.01
DEPDC1B-205ENST00000512078 H0Y626 953 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CCL16O15467 120 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 TRIM16O95361 564 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CCNE2O96020 404 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PRB1P04280 392 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CCDC192P0DO97 292 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 FCARP24071 287 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 HOXC13P31276 330 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MLLT6P55198 1093 aaPredicted RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 SCAPQ12770 1279 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 GRM2Q14416 872 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PLK5Q496M5 336 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MCMDC2Q4G0Z9 681 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PABPC1LQ4VXU2 614 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 C1orf228Q6PIY5 440 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 Q6ZS52 159 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 COLGALT2Q8IYK4 626 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 HNRNPLLQ8WVV9 542 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 ING5Q8WYH8 240 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 LRIG1Q96JA1 1093 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 UBL7Q96S82 380 aaPredicted RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MXRA8Q9BRK3 442 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 TRMT61BQ9BVS5 477 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 RSAD1Q9HA92 442 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 LY9Q9HBG7 655 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 RAI2Q9Y5P3 530 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PTPN13Q12923 2485 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CNTNAP2Q9UHC6 1331 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PTPRBP23467 1997 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 A0A0D9SFI3 127 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CDX4O14627 284 aaPredicted RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 POMCP01189 267 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 RPL17P18621 184 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 SFPQP23246 707 aaKnown RBP eCLIP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CCNE1P24864 410 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 SEC23AQ15436 765 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 USP41Q3LFD5 358 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 WDR44Q5JSH3 913 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 DGKKQ5KSL6 1271 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 ZNF589Q86UQ0 364 aaPredicted RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 LRRC71Q8N4P6 559 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MCRS1Q96EZ8 462 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 B3GALT6Q96L58 329 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 SCLT1Q96NL6 688 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 UBAC1Q9BSL1 405 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 AGO4Q9HCK5 861 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 RBM12Q9NTZ6 932 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 HCFC1R1Q9NWW0 138 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 DNMT3BQ9UBC3 853 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 POLIQ9UNA4 740 aa8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 PIN4Q9Y237 131 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MRPS23Q9Y3D9 190 aaKnown RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 MAFBQ9Y5Q3 323 aaPredicted RBP8.73□□□□□ -1.01
DEPDC1B-205ENST00000512078 CFAP46Q8IYW2 2715 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 TNRC6BQ9UPQ9 1833 aaKnown RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 COL6A6A6NMZ7 2263 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 BCLAF3A2AJT9 711 aaKnown RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 ZNF213O14771 459 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 CAVIN2O95810 425 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 OR1G1P47890 313 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 DSC1Q08554 894 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 SWSAP1Q6NVH7 229 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 MIS18BP1Q6P0N0 1132 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 FUT10Q6P4F1 479 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 MRPL10Q7Z7H8 261 aaKnown RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 CKAP2LQ8IYA6 745 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 FAM227BQ96M60 508 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 SLC32A1Q9H598 525 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 CCDC86Q9H6F5 360 aaKnown RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 AVENQ9NQS1 362 aaPredicted RBP8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 PCDHB2Q9Y5E7 798 aa8.72□□□□□ -1.01
DEPDC1B-205ENST00000512078 SPDYE3A6NKU9 549 aa8.71□□□□□ -1.02
DEPDC1B-205ENST00000512078 F8W810 466 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms