RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 RAX2Q96IS3 184 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 PCED1AQ9H1Q7 454 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 KCTD10Q9H3F6 313 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 METTL14Q9HCE5 456 aaKnown RBP4.3□□□□□ -1.72
CHD1-207ENST00000511628 ING1Q9UK53 422 aaPredicted RBP4.3□□□□□ -1.72
CHD1-207ENST00000511628 EDARQ9UNE0 448 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 CLCA2Q9UQC9 943 aa4.3□□□□□ -1.72
CHD1-207ENST00000511628 WDR33Q9C0J8 1336 aaKnown RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 NARSO43776 548 aaKnown RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 SEC24DO94855 1032 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 PEX11BO96011 259 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 ERVK-21P61565 698 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 CDK17Q00537 523 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 MEF2AQ02078 507 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 APBA1Q02410 837 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 MCL1Q07820 350 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 MRPL49Q13405 166 aaKnown RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 TTF1Q15361 905 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD1-207ENST00000511628 PITRM1Q5JRX3 1037 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 ZNF276Q8N554 614 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 PPP1R14CQ8TAE6 165 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 SLC25A43Q8WUT9 341 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 HAS1Q92839 578 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 UHRF1Q96T88 793 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 FDXACB1Q9BRP7 624 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 TOPORSQ9NS56 1045 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 CEP72Q9P209 647 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 POGKQ9P215 609 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 DPP7Q9UHL4 492 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 EVLQ9UI08 416 aaPredicted RBP4.29□□□□□ -1.72
CHD1-207ENST00000511628 CDY2AQ9Y6F7 541 aa4.29□□□□□ -1.72
CHD1-207ENST00000511628 TNKSO95271 1327 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 A0A1W2PR48 441 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 FZD9O00144 591 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 PPFIA4O75335 1185 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 MTHFD2P13995 350 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 IARSP41252 1262 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 PER3P56645 1201 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 SCAND1P57086 179 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 CCT2P78371 535 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 FAPQ12884 760 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 TRIM25Q14258 630 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 LRRC41Q15345 812 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 FSCN1Q16658 493 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 ABCB5Q2M3G0 1257 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 DCAF17Q5H9S7 520 aaPredicted RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 MSL3Q8N5Y2 521 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 TGFBRAP1Q8WUH2 860 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 CEP89Q96ST8 783 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 QRSL1Q9H0R6 528 aaKnown RBP4.28□□□□□ -1.72
CHD1-207ENST00000511628 CHPF2Q9P2E5 772 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 EID1Q9Y6B2 187 aa4.28□□□□□ -1.72
CHD1-207ENST00000511628 RPTORQ8N122 1335 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 KLRG2A4D1S0 409 aaPredicted RBP4.27□□□□□ -1.73
CHD1-207ENST00000511628 SUV39H1O43463 412 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 AKR1B10O60218 316 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 PHF2O75151 1096 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 ENPP1P22413 925 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 PTPN7P35236 360 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 NEK2P51955 445 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 RABGGTBP53611 331 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 TOB2Q14106 344 aaPredicted RBP4.27□□□□□ -1.73
CHD1-207ENST00000511628 INAVAQ3KP66 663 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 TIGD2Q4W5G0 525 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 SYDE2Q5VT97 1194 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 IGFL4Q6B9Z1 124 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 EFCAB12Q6NXP0 572 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 XYLT1Q86Y38 959 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 MDM1Q8TC05 714 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 ZNF480Q8WV37 535 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 SNX33Q8WV41 574 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 AUTS2Q8WXX7 1259 aa4.27□□□□□ -1.73
CHD1-207ENST00000511628 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
CHD1-207ENST00000511628 WASHC2AQ641Q2 1341 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 TMEM191CA6NGB0 347 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 K7ESF4 209 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 RAMP2O60895 175 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 ITGA10O75578 1167 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 MT-CO1P00395 513 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 GASTP01350 101 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 MGAT1P26572 445 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 ADSLP30566 484 aaPredicted RBP4.26□□□□□ -1.73
CHD1-207ENST00000511628 INHBCP55103 352 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 MXRA7P84157 204 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 FSTL1Q12841 308 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 PDCD1Q15116 288 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 PTPAQ15257 358 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 VPS72Q15906 364 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 C19orf54Q5BKX5 351 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 LY6G5CQ5SRR4 150 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 KCNV1Q6PIU1 500 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 FMNL3Q8IVF7 1028 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 TFAP2CQ92754 450 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 CHFRQ96EP1 664 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 AHCYL2Q96HN2 611 aaKnown RBP4.26□□□□□ -1.73
CHD1-207ENST00000511628 PHACTR3Q96KR7 559 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 PDCD2LQ9BRP1 358 aa4.26□□□□□ -1.73
CHD1-207ENST00000511628 NDC1Q9BTX1 674 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms