RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ELMSAN1Q6PJG2 1045 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 GSTCDQ8NEC7 633 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 SLC22A17Q8WUG5 538 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 TMX3Q96JJ7 454 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 CCDC43Q96MW1 224 aaKnown RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 GAD1Q99259 594 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 POLR3CQ9BUI4 534 aaPredicted RBP12.1□□□□□ -0.47
RNF4-212ENST00000509258 EMILIN2Q9BXX0 1053 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 TUFT1Q9NNX1 390 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 UBN1Q9NPG3 1134 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 CNTNAP2Q9UHC6 1331 aa12.1□□□□□ -0.47
RNF4-212ENST00000509258 ANK1P16157 1881 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 H0Y858 1186 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 ERLIN2O94905 339 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 ASGR2P07307 311 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 RPA1P27694 616 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 CDC25AP30304 524 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 MLH1P40692 756 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 PTGDRQ13258 359 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
RNF4-212ENST00000509258 RABEP1Q15276 862 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 TMC5Q6UXY8 1006 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 CCDC149Q6ZUS6 474 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 TAS1R1Q7RTX1 841 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 FAM184AQ8NB25 1140 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 ACSF2Q96CM8 615 aaPredicted RBP12.09□□□□□ -0.47
RNF4-212ENST00000509258 TMEM175Q9BSA9 504 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 MMTAG2Q9BU76 263 aaKnown RBP12.09□□□□□ -0.47
RNF4-212ENST00000509258 KIFC3Q9BVG8 833 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 APOL6Q9BWW8 343 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 MFSD1Q9H3U5 465 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 DPP7Q9UHL4 492 aa12.09□□□□□ -0.47
RNF4-212ENST00000509258 MYH15Q9Y2K3 1946 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 ARL5CA6NH57 179 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 INPPL1O15357 1258 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 NR1I2O75469 434 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 NPTXRO95502 500 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 EFEMP2O95967 443 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 ALDH2P05091 517 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 XRCC6P12956 609 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNF4-212ENST00000509258 AKAP5P24588 427 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 KLRC2P26717 231 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 AXLP30530 894 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
RNF4-212ENST00000509258 SCNN1GP51170 649 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 POU5F1BQ06416 359 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 TFDP1Q14186 410 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 EEF1DP3Q658K8 133 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 CDCA2Q69YH5 1023 aaPredicted RBP12.08□□□□□ -0.48
RNF4-212ENST00000509258 PADI6Q6TGC4 694 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 GPR149Q86SP6 731 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 TMEM105Q8N8V8 129 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 CCDC51Q96ER9 411 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 NFKBIZQ9BYH8 718 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 SMOC2Q9H3U7 446 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.08□□□□□ -0.48
RNF4-212ENST00000509258 MRPL17Q9NRX2 175 aaKnown RBP12.08□□□□□ -0.48
RNF4-212ENST00000509258 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 LIMD1Q9UGP4 676 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 CFAP54Q96N23 3096 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 NOTCH4Q99466 2003 aa12.08□□□□□ -0.48
RNF4-212ENST00000509258 PROB1E7EW31 1015 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 NRP1O14786 923 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 LILRB3O75022 631 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
RNF4-212ENST00000509258 URODP06132 367 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 CNPP09543 421 aaKnown RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 ITGA4P13612 1032 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 CYP11B2P19099 503 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 IGFBP6P24592 240 aaPredicted RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 CCT6AP40227 531 aaKnown RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 TRAPPC10P48553 1259 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 CLCN4P51793 760 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 CLCN5P51795 746 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 DSC1Q08554 894 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 ORC2Q13416 577 aaPredicted RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
RNF4-212ENST00000509258 NOTUMQ6P988 496 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 DAW1Q8N136 415 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 IGSF22Q8N9C0 903 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 LRRC15Q8TF66 581 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 B3GALT6Q96L58 329 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 KLHL5Q96PQ7 755 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 NACC1Q96RE7 527 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 PAAF1Q9BRP4 392 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 BHMT2Q9H2M3 363 aa12.07□□□□□ -0.48
RNF4-212ENST00000509258 FZD8Q9H461 694 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms