RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ALDH2P05091 517 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 KRT18P05783 430 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 ADRB2P07550 413 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 ANP32AP39687 249 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 GRM5P41594 1212 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 ALDH7A1P49419 539 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 MCL1Q07820 350 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 DSC1Q08554 894 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 COL19A1Q14993 1142 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 SLFN12LQ6IEE8 588 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 ALKAL1Q6UXT8 129 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 FAM178BQ8IXR5 827 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 COLGALT1Q8NBJ5 622 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 GSTCDQ8NEC7 633 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 SPPL3Q8TCT6 385 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 CPB2Q96IY4 423 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 PUF60Q9UHX1 559 aaKnown RBP11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 TBX20Q9UMR3 447 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 PCDHB13Q9Y5F0 798 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 STYXL1Q9Y6J8 313 aa11.63□□□□□ -0.55
POLR2J3-213ENST00000508848 PLXNA4Q9HCM2 1894 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 ARL5CA6NH57 179 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 EPOPA6NHQ4 379 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 CLDN3O15551 220 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 CTNNB1P35222 781 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 SNRPFP62306 86 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 KRT17Q04695 432 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 EHHADHQ08426 723 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 POSTNQ15063 836 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 MPZL3Q6UWV2 235 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 STXBP4Q6ZWJ1 553 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 MAP4K3Q8IVH8 894 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 PDILTQ8N807 584 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 KLHL23Q8NBE8 558 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 HELQQ8TDG4 1101 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 TMEM174Q8WUU8 243 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 PANK2Q9BZ23 570 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 NRDE2Q9H7Z3 1164 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 TOPORSQ9NS56 1045 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 TBC1D13Q9NVG8 400 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 IRAK3Q9Y616 596 aa11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-213ENST00000508848 PDCD11Q14690 1871 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 A0A0B4J269 797 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 NPHP3-ACAD11A0A0J9YXS1 232 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 KIAA0391O15091 583 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 FGF18O76093 207 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 NPTXRO95502 500 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 EFEMP2O95967 443 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 EDN1P05305 212 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 ITGB1P05556 798 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 GALTP07902 379 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 KCNE1P15382 129 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 GATMP50440 423 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 BCAR1P56945 870 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 GRIK3Q13003 919 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 PSMD2Q13200 908 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 DHX8Q14562 1220 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 BMS1Q14692 1282 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 TIGD5Q53EQ6 642 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 HERC4Q5GLZ8 1057 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 KANK3Q6NY19 840 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 UNC13DQ70J99 1090 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 DDX53Q86TM3 631 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 RNF169Q8NCN4 708 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 MAFAQ8NHW3 353 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 DHX58Q96C10 678 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 CCDC34Q96HJ3 373 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 KIFC3Q9BVG8 833 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 CCDC94Q9BW85 323 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 CDT1Q9H211 546 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 NXF3Q9H4D5 531 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 NGRNQ9NPE2 291 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 PANK4Q9NVE7 773 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 CHMP5Q9NZZ3 219 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 COG5Q9UP83 839 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 EXOC7Q9UPT5 735 aa11.61□□□□□ -0.55
POLR2J3-213ENST00000508848 UNC80Q8N2C7 3258 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 MEIS3P2A8K0S8 358 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 EIF3DO15371 548 aaKnown RBP eCLIP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 NR1I2O75469 434 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 THP07101 528 aa11.6□□□□□ -0.55
POLR2J3-213ENST00000508848 CLTAP09496 248 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms