RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 DPF2Q92785 391 aa9.45□□□□□ -0.9
CHD1-205ENST00000508756 MIEF2Q96C03 454 aa9.45□□□□□ -0.9
CHD1-205ENST00000508756 CDK5RAP1Q96SZ6 601 aaKnown RBP9.45□□□□□ -0.9
CHD1-205ENST00000508756 GASTP01350 101 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 PDGFRBP09619 1106 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 GNAT2P19087 354 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 CRHR1P34998 444 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 KRT85P78386 507 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 MGAT2Q10469 447 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 FAM180AQ6UWF9 173 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 Q6ZRM9 215 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 TRMT2AQ8IZ69 625 aaKnown RBP9.44□□□□□ -0.9
CHD1-205ENST00000508756 ANKRD35Q8N283 1001 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 CEP95Q96GE4 821 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 BORCS6Q96GS4 357 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 SLC13A1Q9BZW2 595 aa9.44□□□□□ -0.9
CHD1-205ENST00000508756 TYW1Q9NV66 732 aaKnown RBP9.44□□□□□ -0.9
CHD1-205ENST00000508756 WNT10BO00744 389 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 CCND1P24385 295 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 XYLT1Q86Y38 959 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD1-205ENST00000508756 OR7D4Q8NG98 312 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 ST8SIA2Q92186 375 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 UHRF1Q96T88 793 aaPredicted RBP9.43□□□□□ -0.9
CHD1-205ENST00000508756 GPR20Q99678 358 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 LSM14BQ9BX40 385 aaKnown RBP9.43□□□□□ -0.9
CHD1-205ENST00000508756 BCO1Q9HAY6 547 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 TESMINQ9Y4I5 508 aa9.43□□□□□ -0.9
CHD1-205ENST00000508756 PTPN7P35236 360 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 SREBF1P36956 1147 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 SCNN1GP51170 649 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 PER3P56645 1201 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 APBB1IPQ7Z5R6 666 aaPredicted RBP9.42□□□□□ -0.9
CHD1-205ENST00000508756 PQLC1Q8N2U9 271 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 MDGA1Q8NFP4 955 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 PGBD4Q96DM1 585 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 CPPED1Q9BRF8 314 aaPredicted RBP9.42□□□□□ -0.9
CHD1-205ENST00000508756 CPEB1Q9BZB8 566 aaKnown RBP9.42□□□□□ -0.9
CHD1-205ENST00000508756 LDAHQ9H6V9 325 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 INTUQ9ULD6 942 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 SIK3Q9Y2K2 1263 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 GIT1Q9Y2X7 761 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 SPEF1Q9Y4P9 236 aa9.42□□□□□ -0.9
CHD1-205ENST00000508756 MFAP3LO75121 409 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 IPO13O94829 963 aaKnown RBP9.41□□□□□ -0.9
CHD1-205ENST00000508756 HK1P19367 917 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 SLC6A9P48067 706 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 RABGGTBP53611 331 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 C1QL3Q5VWW1 255 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 ANKS6Q68DC2 871 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 THEMISQ8N1K5 641 aaPredicted RBP9.41□□□□□ -0.9
CHD1-205ENST00000508756 ATXN2LQ8WWM7 1075 aaKnown RBP9.41□□□□□ -0.9
CHD1-205ENST00000508756 PDCD2LQ9BRP1 358 aa9.41□□□□□ -0.9
CHD1-205ENST00000508756 CYP27B1O15528 508 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 ACRV1P26436 265 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 NEK2P51955 445 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 KIF23Q02241 960 aaPredicted RBP9.4□□□□□ -0.9
CHD1-205ENST00000508756 CRHR2Q13324 411 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 PDZD4Q76G19 769 aaPredicted RBP9.4□□□□□ -0.9
CHD1-205ENST00000508756 SPRED1Q7Z699 444 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 ZBTB46Q86UZ6 589 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 GSPT2Q8IYD1 628 aaKnown RBP9.4□□□□□ -0.9
CHD1-205ENST00000508756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHD1-205ENST00000508756 SH3RF3Q8TEJ3 882 aaPredicted RBP9.4□□□□□ -0.9
CHD1-205ENST00000508756 EXTL1Q92935 676 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 CHMP4CQ96CF2 233 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 SERPINB13Q9UIV8 391 aa9.4□□□□□ -0.9
CHD1-205ENST00000508756 FAM171A2A8MVW0 826 aa9.39□□□□□ -0.91
CHD1-205ENST00000508756 C1QTNF3-AMACRE9PGA6 284 aa9.39□□□□□ -0.91
CHD1-205ENST00000508756 ENDOD1O94919 500 aa9.39□□□□□ -0.91
CHD1-205ENST00000508756 RRP1BQ14684 758 aaKnown RBP9.39□□□□□ -0.91
CHD1-205ENST00000508756 USP39Q53GS9 565 aaKnown RBP9.39□□□□□ -0.91
CHD1-205ENST00000508756 GJC2Q5T442 439 aaPredicted RBP9.39□□□□□ -0.91
CHD1-205ENST00000508756 STON2Q8WXE9 905 aa9.39□□□□□ -0.91
CHD1-205ENST00000508756 GPR87Q9BY21 358 aa9.39□□□□□ -0.91
CHD1-205ENST00000508756 PLSCR1O15162 318 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 ALDH1L1O75891 902 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 ZRANB2O95218 330 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD1-205ENST00000508756 INSRRP14616 1297 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 MAN2A2P49641 1150 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 SLC16A1P53985 500 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 DOK3Q7L591 496 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 ZNF572Q7Z3I7 529 aaPredicted RBP9.38□□□□□ -0.91
CHD1-205ENST00000508756 FAM83AQ86UY5 434 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 CEP89Q96ST8 783 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 KRTAP4-9Q9BYQ8 210 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 SENP6Q9GZR1 1112 aaPredicted RBP9.38□□□□□ -0.91
CHD1-205ENST00000508756 KCNH6Q9H252 994 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 LANCL2Q9NS86 450 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 SAP30BPQ9UHR5 308 aaKnown RBP9.38□□□□□ -0.91
CHD1-205ENST00000508756 AJAP1Q9UKB5 411 aaPredicted RBP9.38□□□□□ -0.91
CHD1-205ENST00000508756 HDAC5Q9UQL6 1122 aa9.38□□□□□ -0.91
CHD1-205ENST00000508756 ATRNL1Q5VV63 1379 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 KRTAP23-1A1A580 65 aa9.37□□□□□ -0.91
CHD1-205ENST00000508756 KLRG2A4D1S0 409 aaPredicted RBP9.37□□□□□ -0.91
CHD1-205ENST00000508756 SNUPNO95149 360 aaKnown RBP9.37□□□□□ -0.91
CHD1-205ENST00000508756 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
CHD1-205ENST00000508756 GUCY1A2P33402 732 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms